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Detailed information on CNT3089314


BLAST search results

BLAST vs Swiss-Prot:
sp|P33080|AX10A_SOYBN, E-value = 1e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526585Vigna radiataPhaseolus vulgaris21.3193.290.62192forward
CNT30172882Vigna radiataTrifolium pratense19.4237.6388175forward
CNT30645670Vigna radiataCannabis sativa15.9827.9683.33144forward

Expression of CNT3089314

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MLQKIVSIHFHEFHLHGLAPHQARSDIQELMLSARNCKPTHWVIIPKFFYCLTQQVLK*

>peptide 2 (37 aa)
MYLLFRLLVLFVLNSSSFPFSYNVGVFFLLNFYNVEI*

>peptide 3 (67 aa)
MTPGLQTASFSLQHKLQGDPLPHPYLLKMPFSYQVSGIPLLYVLRLGTIVLPKKDYVRSKLLSCFGK*

>peptide 4 (32 aa)
PWTVTKNFEARLKSKKFMLTCTCYFDYLFSLF*

Sequence

>CNT3089314
CCATGGACTGTAACCAAAAATTTTGAAGCACGATTGAAATCAAAGAAGTTCATGTTGACATGTACTTGTTATTTCGATTACTTGTTCTCTTTGTTTTAAA
CTCATCTTCTTTTCCTTTCTCTTATAATGTGGGTGTTTTCTTTTTATTGAACTTCTATAATGTAGAGATATGATAGTTGAATGTAAATTTTATACATTAA
GAATTAATTGGTTGGCGACAACTAGCTAATTTCTTATTCAACAACTACTACGTAGATCAAAATGACAGATGAAGAATATATGTGAGAAAACACTTCATGT
ACGAAATTTCTCATAAAGTTTTTATACTGTCCCCACATAGATAACAAAAATGGACAGAATTTTTCAAGGTAAGAAAATATGCTACAAAAAATTGTGTCTA
TACATTTTCATGAGTTTCATCTTCATGGATTAGCACCCCATCAAGCGAGAAGTGATATCCAAGAACTCATGCTCTCCGCAAGGAATTGTAAGCCCACCCA
TTGGGTGATCATACCCAAATTCTTCTACTGCTTGACTCAACAAGTCTTGAAATAAAGGTTGGTTCAAGAATGACACCGGGATTACAAACCGCTTCATTTT
CTCTCCAACATAAACTGCAAGGTGACCCTTTGCCACATCCATACCTTTTGAAGATGCCTTTCTCATACCAGGTAAGTGGAATCCCATTGTTGTATGTGCT
GAGACTCGGGACAATAGTGTTACCAAAAAAAGACTATGTAAGATCCAAGCTTTTGAGCTGCTTTGGGAAGTGAATGATATTTGTTGTGCTTAATGCTTGC
AAGCTTGAATATATATAGAGATGAAGAATTCTTTGAAATTGTTGTCTACATAAATAATTGAGGGGGAAAGCTGAGATATGAATCATGGGACCAACAGGGA
G