Detailed information on CNT308929


BLAST search results

BLAST vs Swiss-Prot:
sp|P13192|PSAF_HORVU, E-value = 3e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641545Zea maysNymphaea colorata78.0727.6588.51235forward
CNT30513785Zea maysJuglans regia31.5615.2784.2195forward
CNT30371574Zea maysArabidopsis thaliana46.5127.0880.71140forward
CNT30525128Zea maysPhaseolus vulgaris59.4741.5385.47179forward
CNT30629005Zea maysVigna unguiculata61.1331.5684.24184forward
CNT30709011Zea maysGlycine max61.1320.2682.07184forward
CNT30188078Zea maysSecale cereale82.0625.4994.74247forward
CNT30300474Zea maysTriticum aestivum82.0622.4795.55247forward
CNT30224070Zea maysHordeum vulgare38.5452.0296.55116forward
CNT30394054Zea maysTriticum turgidum81.0624.6795.49244forward
CNT30562386Zea maysActinidia chinensis31.8917.5883.3396forward
CNT3086176Zea maysVigna radiata76.4128.4383.48230forward
CNT30540068Zea maysBrassica napus45.5118.6481.02137forward
CNT30664845Zea maysTriticum dicoccoides82.7241.5795.58249forward
CNT30264705Zea maysBrassica rapa45.5116.3381.02137forward
CNT30609169Zea maysGossypium raimondii20.614.6987.162forward
CNT30620828Zea maysCajanus cajan54.8275.3481.82165forward
CNT30320781Zea maysAsparagus officinalis30.911.3482.893forward
CNT30579105Zea maysEchinochloa crusgalli82.7223.5898.8249forward
CNT30174403Zea maysVigna angularis73.4231.883.26221forward
CNT3040196Zea maysMarchantia polymorpha27.5729.1284.3483forward

Expression of CNT308929

Peptides detected in this lncRNA

>peptide 1 (99 aa)
AGGELDVDDDLPHGGLLLAADGDEVAPADPPDPPGDVEEEQARGDELAPVPLVAADDEVRQAVGAAEQAELAVVLEPPLGLLDGGGRGEKHRRQSQRGRE

Sequence

>CNT308929
GGCGGGTGGCGAGCTCGACGTCGATGATGATCTCCCTCATGGCGGGCTTCTTCTCGCCGCTGATGGCGATGAGGTAGCTCCTGCCGACCCACCCGATCCA
CCCGGCGATGTAGAGGAAGAGCAGGCCCGGGGTGACGAACTCGCCCCAGTGCCGCTGGTCGCCGCTGACGATGAGGTGCGGCAGGCCGTCGGCGCCGCAG
AGCAGGCCGAACTTGCCGTAGTTCTCGAACCGCCGCTTGGTCTTCTCGATGGTGGCGGCCGAGGAGAGAAGCACCGACGACAGAGCCAGCGCGGCCGAGA
A