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Detailed information on CNT3088944


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632291Vigna radiataVigna unguiculata28.9453.8893.89507forward
CNT30597766Vigna radiataFraxinus excelsior7.8228.3184.67137forward

Expression of CNT3088944

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MHIKFDWAATPIKFWRFGFAHIEQIFQNYVFLLELLPLLN*

>peptide 2 (70 aa)
MGIKWTNNKVIYLTLVWKRQNINYKRLSNSDMNIKRTRSIQESKGINNSARKVNSSARRVNRIGKGQSTM*

>peptide 3 (42 aa)
MFSFCKIKYMDIIELVIIEILPIGFFYTEPGYFLLLVQLSQP*

Sequence

>CNT3088944
CTCATTTAGAGCTCTGTAGAAAAAGTTATGGTTAAAACATTGAGCAAAGGTCAGAGCTGTCCAGTTCCAGCGTGAATTTTCGTTTTTACTGTTTTAATTT
CATTTTAATTTTTCCGCATCCACAAACAACATTTCAACCCCCCACTGTGTTAGACCTGATTCTGAACCGCAGTTTGGTCCTTGAGAGACGACCTAGGGTC
ATTCCCTAGCACTATATTGCATTCTTTATGCACATCAAATTTGATTGGGCGGCGACACCCATCAAATTTTGGCGATTTGGATTTGCACATATAGAACAAA
TATTCCAAAACTATGTATTTTTGTTAGAACTTCTTCCTTTGTTGAATTGAGTAATGTTTTCTTTCTGTAAAATAAAATATATGGATATCATAGAATTAGT
GATCATAGAAATATTACCAATTGGTTTTTTCTACACAGAGCCTGGGTACTTTCTTTTATTGGTCCAATTAAGCCAACCATAAATCATTCATAATGTCGAG
TAATAATCTGGAAATTTTTCTCTAAAAATGAAAAAATCGATAGAATAGTACTTCATTACACTTCACGCTCCCCATTTTTTTATCTTTATGATTTAATTAT
TCTCTTTTGGGGGTGAAAGAGGGGATATCTTGATCAGGGGAGAAAACGGGTAAATCCCATATAACCTACTATATCTGACAAGTCGCACTATATATCAATC
CAAGCTGCATCTCTATCCCCAGGGATTCGAAAGGGTACTCTTGGAACACCAATGGGCATAAAATGGACAAATAATAAAGTCATATATCTCACTTTAGTGT
GGAAACGTCAGAACATCAACTATAAAAGATTATCAAACTCAGACATGAACATCAAAAGAACAAGATCAATACAAGAAAGTAAGGGAATCAATAACAGTGC
TAGAAAAGTAAATTCAAGTGCAAGAAGAGTAAATCGAATTGGAAAGGGGCAATCAACAATGTAAACCGTAACAAAGAAAATATAAAAGTGGTATTGAAAA
CTGAATTTGAAAAGTACAAGATACCGGAGTTACTCAGAATCCCACTGTCTGTCATCCAATGGAAAGCCCCAAGAACTCCAGCGAAGAAATCAAAGTTCCT
ATACTATGCAAGTTGTAAAGGAATCTACTCTAAAGCATGAGAAATCAAAAAACCTAGCCTAAGCACACCGTCTGTCACCCCGTGCACGTATCTTAACAAT
GTTACAAAATCCCCTTTTATAGGGAAGAATCAAAACAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAGAAGAAGAAAGGGGAAGAACCGAATAACGGT
TTTAGGAGGTTCGAATATTCTGTAGTATCCTTCAACTAACTCTTACCGCGACAACTTCACTTCGTTCTTCAACCGGCAATCCAGTTCAGCACGACTCACC
GGACCGATCAACATTTTGGGCTGGCTTCATTTGGTCTGATCATCCTCTTGGGTTTTCTTCCCTTGGGCCGTGGGGCTCACGTCAATGCTTCACTGCAACA
CTTCTTCTTTGGGTGTTTAGTCCTCCACCTCCAAGCTTTCATCCTGCACCTCCAAAAATTACCATTTTAACCTTAATTAATATTATTTTAATATTTTCTC
TTTCTTCATTCTGCACCCCTCTAACTTTTTCTCTTTCTTATTAAAGTCAACCTACACCCTTCTAATTTTTTCTCTCTTTTATTAAAGTCATCCTACATCA
TTTTAATAGATTTTAAAATCTATACAATTTTTATATAAATTTTCTAAATTTC