Detailed information on CNT3088309


BLAST search results

BLAST vs Swiss-Prot:
sp|P49390|CYB_BRANA, E-value = 2e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Vigna radiataIpomoea triloba22.7914.8496.17183forward
CNT30378677Vigna radiataArabidopsis thaliana26.537.7794.37213forward
CNT30619453Vigna radiataSesamum indicum23.1626.6596.77186forward
CNT30709047Vigna radiataGlycine max37.4828.9790.37301forward
CNT30180581Vigna radiataSecale cereale20.057.2396.27161forward
CNT30605197Vigna radiataGossypium raimondii20.9220.1991.67168forward
CNT30229163Vigna radiataAnanas comosus6.8525.5890.9155forward
CNT30688824Vigna radiataTriticum urartu20.0511.1494.41161forward
CNT3038142Vigna radiataCucumis melo20.0523.3793.17161forward

Expression of CNT3088309

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MLIKCGGYRCFKKRESLVPYSHFWIFPIVTTLVPPPFFRSGALLQKRIHSCK*

>peptide 2 (44 aa)
MNRKRXGRGSFMKGGKRGVGPPCAALVYLNCMMKLRMLRDWYCI*

Sequence

>CNT3088309
GATTAAGAATTGATCAATGAAAATTAAAATTAGGGTTGTAGTCTGAAAGCTAGATCCACATGAGGTGTGTAATGCATAGCTAAAAAAACGCCAGTCACTA
TCTGAATGACTAAACAAATACCAGCTAACGAACCGAAGCCCCACCAATAACTAAGATTGCTCGGGGTTGGATAATCTATCAAATGTTGATTAAGTGTGTA
ATGCATAGCTAAAAAAACGCCAGTCACTATCTGAATGACTAAACAAATACCAGCTAACGAACCGAAGCCCCACCAATAACTAAGATTGCTCGGGGTTGGA
TAATCTATCAAATGTTGATTAAGTGTGGAGGATATAGGTGCTTTAAGAAGAGAGAATCGTTGGTTCCTTATAGTCATTTTTGGATCTTTCCTATCGTGAC
AACTCTGGTCCCCCCACCTTTTTTTCGTTCTGGGGCACTACTTCAAAAAAGAATCCATTCTTGTAAGTAAGCCCCCATTTTGCCTTGAAAGAATTTGGTT
TCGCTGCGCCCTGAATCAATCAAAAAGCTTCTTTTTTTTTAATTCATCCCATTTTCTTTGGGCNAGAGGGAGGCTGTGAGTCACCTGGGCTACGGATTTG
TCGGTTGGTTGATTCTCGAAATCACCTCTTGAGAAAAAAAGGCCCTCGGGTCCCGACCCAAAAATGAATAGGAAGCGGGNCGGGCGAGGGTCTTTCATGA
AAGGGGGGAAAAGAGGGGTGGGGCCGCCTTGCGCAGCTTTAGTTTACTTGAATTGTATGATGAAATTGCGAATGTTGCGTGATTGGTATTGCATATGATT
TTT