Detailed information on CNT3087924


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549101Vigna radiataIpomoea triloba65.7933.982200forward
CNT30403407Vigna radiataBeta vulgaris60.8645.7981.08185forward
CNT30628922Vigna radiataVigna unguiculata86.84105.1888.26264forward
CNT30591858Vigna radiataMusa acuminata79.6147.7380.17242forward
CNT30171519Vigna radiataTrifolium pratense49.0143.8289.93149forward
CNT30713436Vigna radiataMalus domestica golden27.325.7887.9583forward
CNT30620243Vigna radiataCajanus cajan93.4285.5488.03284forward

Expression of CNT3087924

Peptides detected in this lncRNA

>peptide 1 (29 aa)
DYMDLMETILDCLENMLTKDCTLLTGDCN*

Sequence

>CNT3087924
GGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCTAACGAAGGACTGTACTTTGCTGACTGGGGATTGTAACTAGGGGAAGTAG
GACTATACGATGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGACTGTAAGCAGGTGA
AGTGGGGCTATAGGCAGGTGAAGTTGGGCTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTCGGGCTATAACTGGGTGATGTGGGGCTGTAGCTG
GGTG