Detailed information on CNT3087835


BLAST search results

BLAST vs Swiss-Prot:
sp|O80337|EF100_ARATH, E-value = 5e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30560805Vigna radiataActinidia chinensis5.9629.785.61139forward
CNT30589662Vigna radiataMusa acuminata5.6224.8182.44131forward
CNT30254792Vigna radiataAvena sativa5.9631.183.45139forward
CNT30229217Vigna radiataAnanas comosus2.4924.2789.6658forward
CNT30625134Vigna radiataDaucus carota4.0723.2887.3795forward
CNT30101508Vigna radiataOryza rufipogon6.4357.4784.67150forward

Expression of CNT3087835

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMSFDLHAHTTCFLSVSAVFVVFSATKFTHKLIKSIFRFIFTRSKLLKTLILFALRGENEKQKD*

>peptide 2 (42 aa)
MTNIGTVFTNPTKPPPLISFSSSVFLFFIFSGLAFMAATRMN*

>peptide 3 (37 aa)
MHVLHCATFLSFLGYCFNFFLIRASFCHCHTHLLRIR*

>peptide 4 (30 aa)
MSSESSSLRGSSPQSLLKHGYNLPKLELRE*

>peptide 5 (34 aa)
MLSALASPKVPMYESQGSGASCLRFITCIIPRIS*

>peptide 6 (32 aa)
MMQWIWTCLVRFEIAMDVIGGYKFLARSITSH*

>peptide 7 (42 aa)
MSLLQCLRQSVFFYRLCGVERRIVDCVVEGWMVLGCELNIES*

>peptide 8 (61 aa)
MTTPPSFNFPSHCNFTFFFFISVASRKLVLITQHQFTNPNFFTFHHFHPLYKKMLPLYILH*

Sequence

>CNT3087835
GTTTAAAAATGAATAAAATTATTATAATACAAAAATGGTTGATAAAATATCATATTGTTCTTATTTATTTATTTTGATTGCTTTTGGATTGTCTAAAAGC
CTTTATAGTTGATTTATTTGGGACAGAATGTGGAGGAATAAAGTAAGATGCAACCCAATTCACAAATTTCATAAATATTGAACCAAAAAATGACAAATAT
TGGGACTGTATTCACAAACCCAACAAAACCTCCACCACTAATTTCATTTTCCAGCTCTGTTTTTTTATTTTTTATTTTTTCTGGTTTAGCTTTTATGGCT
GCCACTCGAATGAATTGAGGCAACAATGCATGTTTTGCACTGTGCCACTTTCCTTTCCTTTTTGGGTTATTGTTTTAATTTTTTTTTAATAAGAGCTTCT
TTCTGCCACTGCCACACGCATCTTCTCAGAATCAGATAACTACAAACCGGAATTTACAAAAAGAGCACTGAAATCCACGTCACCATAACGCATTAGTTAA
CCAACAACTGTTCCGCACGTGTGCACTGAGCCACTTGACTTCCCACTTGCCCTGTTCTCAATCCACTAGGAGCCGTCACAGTCGACCCCACCACTTTCTT
CCGCCTCTTAGCCGACGATCCACTCTCCGACGAAGACGAAGGCTCCGGCGACGTTCGCTTCGACGTCACCCGAACCGGTTCGGGCTCGCCCGAATTAATC
CGAAGCGGGAAATTCAACAAAGCCCGAGACCCGCGCATTCTGTACGCGGCTCGGTCGTAAGCCAGCGCGGCGTCCTCAGCCGTCTCAAACGTTCCGAGCC
AAACCCTAGCCCCGTTTTTAGCCGGGTCGCGGATCTCCGCCGCGAATTTTCCCCACGGCCGCTGCCTCACGCCGCGGTAGTGCTTCCCCTTCGCCGGAAC
AACCGCCGGTGCATCCTTGGGAATCACCGGGGGAGTGAAAACAGGTTCCGGTGCCTGAAATACATCCGGTTCGGGTTTCACACTCACTTCCGGGATGAAA
CCCGAAGAAAAACTGTCCGGTGAGTCCGCGTTGAGAGAGGGGACCCACCCTACGTTGACGGCATCGCGAAGAACACCGTAGAGCACCATGTCCTCCGAAT
CATCTTCCTTGAGAGGAAGTTCTCCCCAGTCGTTACTCAAACACGGGTACAACCTACCGAAACTGGAGCTCCGAGAGTAAAGGGAAGTGTTGCCCGAGTT
AACAATCGGGGGTCCGAATTTGAGATCCTCGGAGTCCCCGAGTAAGTGGCGGCGAATGGAATCCAAAAGAGCCAAATCGGACTCGTAGGTAGTTTCTTCG
TACATTTTTGTAACCGAAATGTCTTTGTTGCAGTGTCTTAGGCAATCTGTGTTTTTTTATCGTTTGTGTGGTGTTGAGAGAAGGATCGTGGATTGTGTTG
TTGAGGGATGGATGGTATTAGGTTGTGAATTGAATATTGAAAGTTGAAAGAGAAAGTAGATGAGGGTCTTTATAAAAGGGAAGGTACATGAACTTGGATG
ATAAACTTGAGCTTAATATCAATGGCGTTTAGAAATATTTTAATTTTCAATTGGTGTACGGTTTCGGGTTTAAGTTAAATTCTTTTGGATTTACGAATGT
TGTCAGCCTTGGCTTCTCCGAAGGTTCCCATGTATGAATCGCAAGGTTCAGGTGCAAGTTGCTTGAGATTTATCACGTGCATTATTCCCCGTATTTCGTA
ATAAAATATTTTGTCTATGATGTCATTCGACTTGCACGCCCACACAACTTGTTTCTTGTCTGTTTCTGCTGTTTTTGTCGTCTTCTCTGCCACTAAATTC
ACGCACAAACTAATTAAATCTATTTTTAGGTTTATTTTTACGAGGAGTAAATTATTGAAAACCCTAATTTTGTTTGCACTGAGAGGGGAAAATGAAAAGC
AAAAGGATTAATTTTGGAAGAGAAAAAGCAGAAGCAGAAAAGAAAGAATGGCGAAAGTGGAAGTAGACTGAGAGGAAATGATGCAGTGGATATGGACATG
TTTGGTGAGGTTTGAAATTGCAATGGATGTTATTGGTGGATATAAGTTTCTTGCAAGGTCAATAACCTCCCATTAATTAATCTACTTGCCAAATGACGAC
CCCACCCTCCTTTAATTTTCCATCTCACTGTAACTTCACTTTTTTTTTTTTTATCAGTGTTGCTTCCAGGAAGCTGGTGCTCATCACACAACATCAATTC
ACAAACCCTAACTTTTTCACATTTCATCATTTCCATCCCCTTTATAAAAAGATGCTACCACTCTATATTCTACATTAATCAGATAATGGCCTTTCGATTA
TATATTAAACAAATCTTTACCATATTTAATTTT