Detailed information on CNT3087354


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30598088Vigna radiataFraxinus excelsior42.9917.5685.2695reverse complement
CNT30322630Vigna radiataAsparagus officinalis41.634.5586.9692forward

Expression of CNT3087354

Peptides detected in this lncRNA

>peptide 1 (54 aa)
AACLCKVPATHRNADCHPTDHHNAFQCALSSLTHFPGKLPRRSPIPEFLQVKHA*

>peptide 2 (62 aa)
PLLAFVRSRQLTGMLTAIPQITTTLSSVLCPHSHTFRENFPEGHPSQNFSKLSTLNYGVLMG*

Sequence

>CNT3087354
CCGCTGCTTGCCTTTGTAAGGTCCCGGCAACTCACAGGAATGCTGACTGCCATCCCACAGATCACCACAACGCTTTCCAGTGTGCTTTGTCCTCACTCAC
ACACTTTCCGGGAAAACTTCCCAGAAGGTCACCCATCCCAGAATTTCTCCAAGTTAAGCACGCTTAACTATGGAGTTCTTATGGGTTAGGCTGCCGAAAA
GCAAATGCATTTGGTGATATG