Detailed information on CNT3086999


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 1e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30716451Vigna radiataMalus domestica golden8.8622.3683.8793reverse complement

Expression of CNT3086999

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLLLIFVNLKKMRFIVHSNKKLYVGRDLRCKEL*

>peptide 2 (30 aa)
MGPNHRQIIWCCLRIFTCVSRTERCIVFSML

>peptide 3 (32 aa)
MLEEIFAARNCEATHEMIISKLFLSLTQQVLE*

>peptide 4 (31 aa)
IRNNSRCKLSIYGLCSTLIIHVSGISRDRNW*

>peptide 5 (38 aa)
MLEQLSTFSLLKEITDSDFVNSMVFHFLNSQERDYFTS*

>peptide 6 (45 aa)
MFLFYKNVTTNLCQPKKNEIYCPLKQEVICWKRSSLQGIVRPPMR*

Sequence

>CNT3086999
CATTCGTAACAACAGTAGATGCAAGCTCTCTATTTATGGTCTATGCTCCACCCTCATCATACACGTAAGTGGGATTTCTAGAGACAGAAATTGGTGATAA
ATTGCATGCTACCATGTATATGCCTTAAACATCTGCTTATTGCAGTGTAAGGTCAATAAATTTAGTCTTTCTCTTTGGTCCTAGAAAAACACTTTGCTCT
ACCCTTGTTTAGAATAAAGTGCTCTCTTCCGACTTTCAATTTTCCTAAAATATAGTATTGAACTGTAACAATGTAACTGACAAACAAAATACTCAGAAGA
GATGCTTGAGCAGTTGAGTACATTCTCATTGCTGAAAGAAATCACAGACTCTGATTTTGTCAATTCGATGGTTTTCCATTTCCTAAATTCTCAAGAAAGA
GACTACTTTACAAGTTGAGAATGTTCCTATTTTACAAAAATGTTACTACTAATCTTTGTCAACCTAAAAAAAATGAGATTTATTGTCCACTCAAACAAGA
AGTTATATGTTGGAAGAGATCTTCGCTGCAAGGAATTGTGAGGCCACCCATGAGATGATCATATCCAAACTCTTCCTCAGCTTGACTCAACAAGTCTTGG
AATAAAGGTTGGTTCAAGTGTGATACAGGAATCACAAACCGTTTCATATTCTCTCCCACATAGACTGCAAGGCATCCCTTTGGCGCATCCAACACTTTTG
AAGATGCTTGATTTCTGCCAGATGAAGTCCTTCTGATACCGGGTAAACGGAAGCCCATTGTTGTATTAACCGTGTGAGAAATTCGAAAACAAAAGGGTTT
TGAGAAATTCTTGAAACTAAGTTTTTGAATTTTGAATGCTTTAGGATATGGATGATCTGTGTTGGTTCTAAAAGTGTGCAACCATGAATTATATATAGAG
ATAAACGGCTATCGGAGAAACCAATTGATAGATGAATTATTGATGAGATTGGAATAATGGGGCCAAATCATAGACAAATTATATGGTGTTGTCTTCGAAT
TTTTACATGTGTCTCCAGAACAGAAAGATGTATCGTGTTTAGTATGTTAC