Detailed information on CNT3086845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369801Vigna radiataOryza glumipatula22.4115.888.0667reverse complement
CNT30483069Vigna radiataChara braunii21.747.5689.2365forward

Expression of CNT3086845

Peptides detected in this lncRNA

>peptide 1 (98 aa)
RIKGVVDITNPTRFGLSVAIAGFSTVPSTPFTSLGDLSSSRILLLHALDDTNSHSLTHVSHSKTTKWGIFREGFNHHGLCGNHLHKTSISVLQEFRLLL

>peptide 2 (40 aa)
MSLTAKRPSGGYSEKVSTTMGFVGIIFTKPASPFFKNLGSF

>peptide 3 (35 aa)
PNQGCGGYNQPDPVWLVGSHCWILYCSQHSIHQPW*

Sequence

>CNT3086845
CCCGAATCAAGGGTGTGGTGGATATAACCAACCCGACCCGGTTTGGCTTGTCGGTAGCCATTGCTGGATTCTCTACTGTTCCCAGCACTCCATTCACCAG
CCTTGGTGACCTTAGCTCCAGTAGGATCCTTCTTCTCCACGCTCTTGATGACACCAACAGCCACAGTCTGACGCATGTCTCTCACAGCAAAACGACCAAG
TGGGGGATATTCAGAGAAGGTTTCAACCACCATGGGCTTTGTGGGAATCATCTTCACAAAACCAGCATCTCCGTTCTTCAAGAATTTAGGCTCCTTCTC