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Detailed information on CNT3086745


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF43|KCS6_ARATH, E-value = 5e-170

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710299Vigna radiataGlycine max48.9156.6287.31449forward
CNT3029107Vigna radiataTheobroma cacao11.2220.0883.5103forward

Expression of CNT3086745

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RTTCTNLYLALLRSDLRFDNKIAAPPIRNKQFGRSMARSLPW*

>peptide 2 (55 aa)
MKMMRKEEQRIWRRSKWREFQRERISSGPKRRTSTEMAMMMGMRVRVRMWLTRYW*

>peptide 3 (74 aa)
MPERLKLLMLLLSLNLLMTIADKEGVGEKRLQLTMRISMSLGLRPVLANKDSMAEKITSSASPLAASMVGLGGM*

Sequence

>CNT3086745
TTCGAACAACGTGTACCAATCTGTACTTGGCTCTCCTACGTTCGGACCTACGGTTTGACAACAAAATAGCAGCACCCCCCATTCGGAACAAGCAATTTGG
AAGAAGCATGGCTCGCTCGTTGCCCTGGTAGTAGTTAGGAGTTATGATCTCAGTGCTGACAACGACGGCGTTTGAATTGGGGTGGACTTGAAGAAGGCCA
GCACTGCAACCCATGCCGGAGAGGTTGAAGCTCTTGATGTTGCTTCTGAGCTTGAACTTATTGATGACCATAGCAGACAAGGAAGGAGTGGGAGAAAAGA
GGCTGCAATTAACTATGAGGATATCTATGTCCTTGGGCTTGAGGCCAGTTTTGGCGAACAAAGATTCCATGGCAGAGAAAATAACAAGCTCGGCCTCTCC
TCTGGCAGCCTCCATGGTGGGTTTGGGAGGGATGTAGTGAATGGCGGGAGGGAGACAGGTCTCTTCACCGAGGCCAGAACGTTCTAGAATCCTCATTTGA
AACTCGACACTCTTGGGGTTGTTCTTCAAGATGAGTCTGGAGTGTTCCATGAAGGTAGCAAAAGGAACACGGCATGTTACGGGAGGTTTGAAGCAAGCAT
AGTCAACGAGGTAGATGGTGCGAGGCTTTGACATGAAGTAGACGGTGGCTATGAAGATGATGAGGAAGGAGGAGCAGAGGATTTGGAGGAGATCGAAGTG
GAGGGAGTTCCAAAGGGAGAGGATCTCGTCGGGGCCCAAACGTAGAACCTCAACGGAGATGGCAATGATGATGGGAATGAGAGTGAGGGTGAGAATGTGG
TTGACGAGGTATTGGTAGCCAAGTTTGACATACTTGAGCTTGACAGAGTTGGAGAAATCCGGCAACACTGGAGGCATGTTGAGTTGGTTGAGGAAGAAAG
AGAAGAAGAAGGTTTGAT