Detailed information on CNT3086662


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZG8|MIK2_ARATH, E-value = 3e-100

BLAST vs NONCODE:
NONGMAT000810, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711984Vigna radiataGlycine max5.8435.1487.6397forward
CNT30146611Vigna radiataMedicago truncatula12.7150.1282.94211forward

Expression of CNT3086662

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLSQKYFPCQYSKTIHVTFFIHFHYVCKF*

>peptide 2 (36 aa)
MLRCRISVRAWISLVKAFTLSFSSFGTECSFFTATT*

>peptide 3 (46 aa)
MYNKAFATSLITFTLLFQSKAIACSSSFKIFWTLPFSKNSHTINDH*

>peptide 4 (48 aa)
MRCLSSKFSVASTIFSNTILPSKLHIANVFEVCKLVASSSIFIEVLHK*

>peptide 5 (33 aa)
MQASAIFATDATSLSKCFVGGGRRCSNLSINVI*

>peptide 6 (44 aa)
MPILQNYTRHIFHSLPLCMQVLKQTKKLISYALKENIVTKIKYR*

>peptide 7 (53 aa)
MTFFVICLCDFPLSVRQGFKPLTLPHKPLLFLTASIVALRKTGMFGSGPSKSL*

Sequence

>CNT3086662
AAAAAAATACAGTACAAAATAGAAAATAGCAAGTAAAACCAAATGTTGTTTAATAACTTCACTCTTTACTTACGCACGTAAGTTGAGATGTCGAGTCCAT
CAATTGAAGATGAGCTTTAAACTACAAGCTCATTGACAACCTCCTTCATAGTAGGGCGAGATTGTGGACTTTCAGTCATGCAAGCAAGTGCTATCTTCGC
AACTGATGCCACCTCTTTAAGTAAATGTTTTGTTGGAGGAGGGAGACGCTGCTCCAACTTATCCATCAATGTCATATGATCAACAGTGGACGAAGATGAT
AATAAGGAAGATATAAAATCACCAGGATGCTTTCCCAGAAGTATTTCCCATGCCAATACTCCAAAACTATACACGTCACATTTTTCATTCACTTCCATTA
TGTATGCAAGTTCTGAAACAAACTAAAAAGCTGATATCATATGCATTAAAGGAAAATATAGTGACAAAGATAAAATATAGATAATTGTGACCAACAAAGA
AAAACTAAAAACTATGGTACAAGGAAAGAAAATTGACCTGGAGCGGCATATCCGAAGGTTCCTACAAATGAGGTCCAATTGGATGAATTGGGATTAAGAA
ACTTNGNTGTTCCGAAATCNGAGACATGTNCCACATATTCNAAATCCAAAAGGACATTTTTACTTGATATATCACGATGAATAATTGGTGGTGAGCAATC
ATAATGCATGTACAATAAAGCATTTGCTACATCTTTAATAACATTCACTCTCTTATTCCAATCAAAAGCAATTGCTTGTTCATCATCCTTCAAAATATTC
TGGACATTGCCCTTCTCCAAGAATTCACACACCATAAATGACCATTGAGAATGTGAACAAAACCCATATAACTTTACAATGTTACGATGCCGAATTTCTG
TCAGAGCTTGGATCTCACTTGTGAAAGCTTTCACATTGAGCTTTTCTTCATTTGGAACTGAATGCAGTTTCTTTACAGCCACAACTTGACCTGAGGGTAA
CATTGCTTTGTAAACTTGTCCTTGCCCTCCAACTCCAATGAGATGCTTATCGTCAAAATTTTCAGTGGCTTCAACAATATTCTCAAATACCATTTTGCCA
TCAAAACTCCATATAGCAAATGTGTTTGAAGTTTGTAAATTGGTAGCTTCCTCTTCCATTTTCATTGAAGTTTTACATAAATAATACAAGACTCCAATAA
CAAACAATGCCAGCATTAGAGTGCCCAAAGTAAGGGGTAGAACCATTGTTATGACTTTCTTTGTCATATGCTTATGTGATTTCCCACTTAGTGTTAGGCA
AGGCTTTAAGCCACTAACATTGCCACACAAGCCTTTATTATTTCTTACTGCGTCAATTGTAGCATTGCGAAAGACTGGAATGTTTGGAAGTGGACCCTCA
AAATCATTGTAAGATATATCAATAGATGTCAAGCTCATCATTTCATCAAAGATAGAAAGATCACCTGAGAGACTATTGTGAGAGAGATTCAATGTTTCTA
ATTTTTTTAACCCTCCAAGCACATGTGTTAATGTTCCCCTCAACAAATTTTCGCTGAGATCAAGAGTTGTAAGAGATATTAATTTGCCAAGCTCTAAGGG
AATATTTCCCTCAAATTTGTTCTGACTCAAATTCATTTCCAATAAACTGAGCAAATTTCC