Detailed information on CNT3086406


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709030Vigna radiataGlycine max10.1453.7184.52239forward
CNT30568533Vigna radiataActinidia chinensis3.7834.984.2789forward
CNT30650814Vigna radiataRosa chinensis3.3126.9984.6278forward
CNT30626568Vigna radiataDaucus carota3.1425.7886.4974reverse complement

Expression of CNT3086406

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSCKSKRSLCFIVCLFYLTAKHFLQAISFV*

>peptide 2 (31 aa)
MGTRTQNNNACQTMLAINIKQLIPKRNLELK*

>peptide 3 (29 aa)
MEKKYECFKSVDEKRFQKMQSNLFKFDIW*

>peptide 4 (49 aa)
MSMRRKRQKGTTERNGFSRLRVTAIRPLRRASRPGIVRRITIMASAAAA*

>peptide 5 (61 aa)
MEKQYIKENKAEENSRALQLTCQSTLTERDSACCLTFRIRIYPLGKKWEQGRKITMHAKPC*

>peptide 6 (34 aa)
MLWFTKNKLLNIRKVQLPCVEHMGIKHHSRQNKK*

>peptide 7 (44 aa)
MNMQVNYVIYKIKLWKKSMNALKVLMKKDSKKCRVTYSNLIYGN*

Sequence

>CNT3086406
GCTAAATGTTCAAAACTGATGACTTAAAATTTTCATTTTCATATTTTCAAATTTGTTATAAATGATTTCTTAACATGTTAAACTTAGAGAAAAATATAAA
TATCTTGTTGGAACGGAACCGAATCAAATTAAGTAATTGCCTTCCAATTTACTAATTATAATTATTTAAAAAATACGCAACATTTTCTCTAATTTAAGCT
ATTAAAATGTTATAAATACATTCTTCAAACTAGAATGATTTCCGTTAAATTAGTAACTATTTTTTAATTATCTTTAGTTCACGAATGTCTTGTAAAAGTA
AACGAAGTTTATGTTTTATTGTTTGTTTATTCTATTTAACTGCAAAACATTTTTTACAAGCTATAAGCTTTGTTTGATTTTGTAAATAGTCTTCGTAAAT
AATCTCAATACTTCCAACGATTAGTCTTTAACCCAAAACATGCTCTGGTTCACCAAAAATAAATTACTGAACATAAGAAAGGTTCAATTACCATGTGTTG
AACATATGGGCATCAAGCACCATTCACGCCAAAACAAGAAATAACAAATCTTGGGCTGAAAACTTAGGGCATCTCTCCCTGAGATTTTTTAGGAAGGTTC
TTTCAAGTTAAACAGTATTGCTTGCTGGGTACATAACATCAATATGTTTATGCAAACAACGTTATATATATAAAAGCAAGAATGAATATGCAAGTTAATT
ATGTAATCTACAAAATTAAATTATGGAAAAAAAGTATGAATGCTTTAAAAGTGTTGATGAAAAAAGATTCCAAAAAATGCAGAGTAACTTATTCAAATTT
GATATATGGTAACTAAACATATATCAAATTTGAATAATCTAACCATTGGTTAGATTGTTGAGCATAGCATTTAAGAAGCTTTTGGCGGAAGACAACTAAA
GATATGGAAAAGCAATATATTAAAGAAAATAAAGCAGAGGAAAATAGCAGAGCATTACAGTTAACATGTCAAAGCACTTTAACAGAACGAGATTCTGCAT
GTTGCCTCACCTTCAGGATTAGAATATATCCACTTGGTAAAAAATGGGAACAAGGACGCAAAATAACAATGCATGCCAAACCATGTTAGCAATTAACATT
AAGCAGCTTATACCAAAACGGAATTTAGAGTTAAAATAAAACTAACACCAGAACAAAATTTGGTTTAGCAGATAATAGAGTGGTATATTCAAAAATGGGG
ATATAGCTCATTACGTCTTCAATCTTAAAATCTCTACAAAACAAAAATTCGAGAGCTAAAACTTGAAGCCTACATAGAATTTGAGTATAACGAATACTAA
CATTCTTTAGGGTCATGCGAGGTTCAATCATTGCAATGTTAGAGATCACATTCCTAATTTAAGAGCTCTCGGCACTTGAAAAAGAGAATTTGATAGCAAG
ATGGTAGAACTCCTTATACGTCACCGAATTCAATCAATCAAAATCCAACTTCAGCTGCACATGTTGTTGAACAAAAATTAACAAATTCAGGTTTGACACT
TGACAGTTTTCGTTTTATCACACTCCAATTGACGTGTTGTAACGTACAATGTGCATAAATTCCCATGGCAACAAACAGCAATAACAATTGATAATAACGC
GCATAATCAAATTAAGCACGCATTTCAGATAACACCGGAGAATAATCGAAATCACGCTTTCCTACGATACAAGAGAGGGACGAGGTAGACGCGATTGGAT
CCCGCAGCGGAAAAATAAGAAAATCCCCAAAAGAAACCCTAGGCGGCGAAAGTAGAAGTTGCATAGAAAAAAGTAACACTAGAATAAACTCAATAACTGT
CTCGGTGCAAACACGGATTTAGAAATAAAAAAAGAAATCGACGTAAACGAATTCTTCCCCGCAGAAGTAGAAGGCAGAACAAGAGGAGACATATTTGTGA
GGGATGGAATAACAGACTTATCTGCGGTCGCTTCAGTCGCGATTCTTCAAGCGTTCGAGGCGCTGGTTGAGTTGTTCAATCTTGACGACGAGGTTGGTGA
CGGAGTAGAGGAGCCAGTAGAAGAGGAGGGCGGAGGTGTTCGGAGGGGGTGCAGGATTCACCCTCGCAGCTGGGGCGAGTCTCATACTTCCAGTAAATGT
CCATGAGGAGGAAGAGGCAGAAGGGGACGACCGAGAGGAACGGCTTCAGCAGGTTGCGGGTGACCGCGATCAGACCTTTGCGGAGGGCATCGAGGCCGGG
GATCGTGAGGAGAATAACCATTATGGCCTCTGCGGCGGCAGCGTAGCCTAACACAACCCACTCTAGCGCCATGAGATTAGATCTCAGCTTCTGATGATGC
TTCTTCTTCTTTCTTCTTTCTTCCTTTACAATTCCAATGAAAGAGGTGCTTCTTCC