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Detailed information on CNT3086376


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525128Vigna radiataPhaseolus vulgaris44.561.0295.44263forward
CNT30623157Vigna radiataDaucus carota23.1813.8481.75137forward

Expression of CNT3086376

Peptides detected in this lncRNA

>peptide 1 (68 aa)
IGLNILGNEVTVDELSVGSNGPTEPPEEQARGERNVDDDLLHRRFFLIPDGNKVAPTHPPDPPGDVQE*

>peptide 2 (55 aa)
MYRNRNPGVMNSPQCLWSPLTIRCEGLQIGGYVVVVVGVVVGSSTADDGGAQFGA*

>peptide 3 (55 aa)
MLLLLSELLLGVALQTMVGRSLEPSLGRRAAGLDRLVGIVSDMVGCLERVCENGV*

Sequence

>CNT3086376
AATTGGGCTAAACATCCTTGGCAATGAGGTCACCGTTGATGAGCTCTCTGTAGGCAGCAACGGGCCAACTGAACCCCCGGAAGAGCAAGCGAGAGGCGAG
AGGAACGTCGATGATGATCTCCTTCATCGTCGGTTTTTTCTCATCCCTGATGGCAATAAGGTAGCTCCGACCCACCCACCCGATCCACCCGGCGATGTAC
AGGAATAGGAACCCAGGAGTGATGAACTCGCCCCAGTGCCTCTGGTCCCCGCTCACGATCAGGTGCGAAGGCCTTCAGATCGGAGGATATGTTGTTGTTG
TTGTCGGAGTTGTTGTTGGGAGTAGCACTGCAGACGATGGTGGGGCGCAGTTTGGAGCCTAGTTTGGGGCGGAGGGCGGCAGGCTTGGATAGATTGGTGG
GAATTGTGAGCGACATGGTTGGATGTTTGGAAAGGGTGTGTGAGAATGGAGTGTAGGGTGGTAAGAGAAGTAAGAAAGGTTTTTAGATTCTGATAGAGGC
AGATTGGTGGTTGTTAACTAAGGAGAGTGTTGTGGATTGTGGATAAGGTGAGGAAAGTGAAGAAGCTGAGTTGGATTCTCGTTATTGGTTC