Detailed information on CNT3086243


BLAST search results

BLAST vs Swiss-Prot:
sp|P46286|RL81_ARATH, E-value = 7e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440942Vigna radiataAegilops tauschii13.8728.5795.1662forward
CNT30721746Vigna radiataTriticum spelta38.710.7686.13173forward
CNT30338628Vigna radiataEragrostis tef51.0164.2384.65228forward
CNT30367313Vigna radiataSorghum bicolor32.8925.8885.03147forward
CNT30646608Vigna radiataCannabis sativa38.9337.3484.48174forward
CNT30104724Vigna radiataOryza rufipogon44.318.9785.35198forward
CNT30578506Vigna radiataOryza barthii44.312.4585.35198forward

Expression of CNT3086243

Peptides detected in this lncRNA

>peptide 1 (76 aa)
TVYELTGIKAFGGNEELVLLLVSEWVAESHLGKWGTATRVVDDVGNDTLKVAIPLPEVEAPEASRSLAVVGVGLED*

Sequence

>CNT3086243
CCACAGTATATGAACTGACCGGTATAAAGGCCTTCGGCGGCAACGAAGAGCTCGTTTTGCTTCTTGTATCTGAATGGGTGGCGGAAAGTCACCTTGGCAA
GTGGGGCACCGCGACCAGGGTCGTGGATGACGTCGGTAACGACACCCTTAAGGTAGCCATTCCGCTCCCCGAAGTCGAGGCTCCGGAAGCGAGCCGGTCC
CTTGCGGTGGTGGGTGTGGGACTTGAAGACTGAGCCCGCACCCTTACGCTGTGCACGGATTACACGTCCCATTGCAGTTCTGCAATGTTCGATAACCTAC
CGCTGAAATGGAGTGACGATTCTAGGTTAATGGAGACTTACATAGGACGAGTACTTTCAGTGTTTCAGTGATGCGTTTCATTTTCTTGGACTTAGGTCAA
TATGGGCCGGCCCAAACCCGATAAGATTTGGAATGTGTGACGAAAAT