Detailed information on CNT3086242


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393404Vigna radiataTriticum turgidum26.138.3784.6998reverse complement
CNT30627909Vigna radiataDaucus carota27.27.3386.27102reverse complement
CNT30680683Vigna radiataTriticum urartu26.9319.285.15101reverse complement
CNT30574572Vigna radiataVitis vinifera281.5685.71105reverse complement

Expression of CNT3086242

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLYPYVAYVRTGFSCGNIEGFLSLLIGILVYALITVDAFTTVLELL*

>peptide 2 (32 aa)
IFEQFRSYEEQYSFLRSYLSSRFYLKISNEIF*

>peptide 3 (35 aa)
MWKHRRVFITANWYLSLCINYGGCIHHSFRIVVNP*

>peptide 4 (39 aa)
MKFSSGPIQTGVLQVIFRHIVIGFMLVMFKSYVLCYIHM*

Sequence

>CNT3086242
GAATTTTTGAGCAATTCAGGTCATATGAAGAGCAGTATTCTTTTCTGAGATCATATTTGAGCTCCAGGTTTTATTTGAAGATAAGCAATGAAATTTTCTA
GTGGACCAATTCAAACAGGAGTTCTACAAGTTATATTCAGGCATATCGTGATCGGATTTATGTTGGTAATGTTCAAGAGTTACGTTCTATGTTATATCCA
TATGTAGCTTACGTTCGTACTGGTTTCTCATGTGGAAACATAGAAGGGTTTTTATCACTGCTAATTGGTATCTTAGTTTATGCATTAATTACGGTGGATG
CATTCACCACAGTTTTAGAATTGTTGTGAATCCATAGCTGTTGAATATCCACATTTGGTGACTTGAGCTTTCTGG