CANTATAdb - search

Detailed information on CNT3086240

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 3e-177

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30532219	Vigna radiata	Eucalyptus grandis	78.89	75.09	81.39	1263	forward
CNT30525141	Vigna radiata	Phaseolus vulgaris	91.38	84.52	87.29	1463	forward
CNT30629221	Vigna radiata	Vigna unguiculata	69.83	87.21	89.45	1118	forward
CNT30124865	Vigna radiata	Physcomitrium patens	55.22	66.12	81.45	884	forward

Expression of CNT3086240

Peptides detected in this lncRNA

>peptide 1 (32 aa)
HKLEAYLSNKQIYKILTYIVYIKKIHYPYINI*

>peptide 2 (30 aa)
MVFPVKVFTKICMPPRSLKTKCKVDSFCML*

>peptide 3 (53 aa)
MQGRFLLNIVVCQGTTILQLLPSKNKPLLIWWDSLLVLNLCLHIIDCIRALHL*

>peptide 4 (50 aa)
MPSLSWIFALTLSMVSELSTSKVMVFPVKVFTKICIPPLNRSTKWRVDSF*

Sequence

>CNT3086240
GGCACAAACTGGAGGCTTATTTAAGCAACAAACAAATATATAAAATACTCACATATATAGTATATATAAAAAAAATACATTACCCATATATAAATATATA
AAAAGCTATTTCTTAGTAGTTAACAAACAATAGCGATGATACACACATATACTAGTCTTAGAACATAAGAAAAACACCCAACCAGGAACTGCAACACACG
ATTTCAATTGACACTGGACATAATAGACACGAGGCTTAGAAACCACCGCGAAGGCGAAGAACAAGATGCAGGGTAGATTCCTTCTGAATATTGTAGTCTG
CCAAGGTACGACCATCCTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATC
GATTGTATCAGAGCTCTCCACCTCTAAGGTAATGGTTTTTCCTGTCAGAGTCTTCACAAAAATCTGCATTCCACCACGAAGCCTCAACACCAAGTGCAGA
GTGGATTCCTTCTGAATGTTATAATCTGCAAGGGTACGACCATCTTCCAATTGCTTCCCGGCAAAAATAAGCCTCTGTTGATCTGGTGGTATGCCCTCCT
TGTCCTGAATCTTTGTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATTGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCATTCC
ACCACGAAGCCTCAACACCAAGTGTAGAGTGGATTCCTTCTGGATGTTATAATCTGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGT
CTCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCAACCTCCAGAGTTATGGTTTTCCCGG
TTAAAGTCTTCACAAAAATCTGCATGCCACCACGAAGCCTCAAAACCAAGTGCAAAGTGGATTCTTTCTGTATGTTATAATCCGCAAGGGTCCTTCCGTC
TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGGGGTATACCCTCCTTATCCTGAATCTTTGTTTTCACATTGTCAATTGTATCTGAACTC
TCCACTTCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCATACCACCTCTCAAACGAAGCACCAAGTGAAGGGTTGACTCCTTCTGAA
TATTGTAATCAGCAAGGGTCCTTCCATCCTCAAGTTGTTTACCAGCAAAAATAAGCCTCTGTTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTCGC
CTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCATACCACCCCTCAACCGAAGC
ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGAG
GGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAAA
G