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Detailed information on CNT3086153


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Vigna radiataOryza sativa64.712.5383.22143reverse complement
CNT30282912Vigna radiataChenopodium quinoa79.6416.4285.8176reverse complement
CNT30632292Vigna radiataVigna unguiculata98.647.2797.25218reverse complement
CNT30505351Vigna radiataNicotiana attenuata50.683.2285.71112reverse complement
CNT3095993Vigna radiataSolanum tuberosum78.284.3284.39173reverse complement
CNT30291829Vigna radiataTriticum aestivum76.924.3181.76170reverse complement
CNT30541450Vigna radiataBrassica napus83.716.5883.78185reverse complement
CNT30554216Vigna radiataOryza glaberrima64.7121.9383.22143reverse complement
CNT30660677Vigna radiataTriticum dicoccoides76.9212.7481.76170reverse complement
CNT30598585Vigna radiataFraxinus excelsior65.611786.9145reverse complement
CNT3017974Vigna radiataZea mays76.926.2881.76170reverse complement
CNT30205079Vigna radiataHelianthus annuus76.9223.5184.71170reverse complement
CNT30689283Vigna radiataTriticum urartu76.926.781.76170reverse complement
CNT30621081Vigna radiataCajanus cajan84.1617.8293.01186reverse complement
CNT30409854Vigna radiataPapaver somniferum83.2627.7584.78184reverse complement
CNT30121210Vigna radiataCitrus clementina78.284.4486.71173reverse complement

Expression of CNT3086153

Peptides detected in this lncRNA

>peptide 1 (62 aa)
EQLENYKNXAIDFEQQRVINQVRQRVLQQVLQGGLGTLNSCLNNELHLHTVSANIGMFGMMK*

Sequence

>CNT3086153
GAACAATTAGAAAATTACAAAAACNAAGCCATTGATTTTGAACAACAAAGAGTTATTAATCAAGTTCGACAGCGGGTTTTACAACAAGTCTTACAGGGAG
GTCTAGGAACTCTAAATAGTTGCTTGAACAACGAGTTACATTTACATACTGTCAGTGCTAATATTGGCATGTTTGGGATGATGAAATAAAAAAATAACTG
ATTAGGCTTTCTATTATAAAA