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Detailed information on CNT3086050


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710862Vigna radiataGlycine max24.1227.8886.67150forward

Expression of CNT3086050

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMIGQALAIVTLLKIYKTKKKRWTHAKET*

>peptide 2 (66 aa)
MDTCKGDMSLFFDSQYTTQLTMTLTSSFHHSHASLYFPLPPYDPDPARDPASDPALEDPEPAWDPA*

>peptide 3 (81 aa)
MHRFTFRYHRMILTQHETLLLTQLWRTLSQHGTLHRNQLRNLLRSLIPMTKKKNQNLNKMKSRSQNPSLHLHQSRHHQGSI*

Sequence

>CNT3086050
CTTAATGATTCTTAAAAATGAAAACGAAGTGTATCTATATTTAATTAATCTAAAAACTAATTTATTATAAAATAAAATATTAAGATTACACACATAGCCA
TCTCTCTTTTCTTAGTCAACAGACAGTGATGATGATTGGACAAGCACTAGCCATAGTTACTTTATTGAAGATATACAAAACAAAAAAGAAAAGATGGACA
CATGCAAAGGAGACATGAGCTTATTTTTTGACTCACAATATACTACCCAACTAACAATGACACTAACATCTTCCTTTCACCACTCTCATGCATCGCTTTA
CTTTCCGTTACCACCGTATGATCCTGACCCAGCACGAGACCCTGCTTCTGACCCAGCTCTGGAGGACCCTGAGCCAGCATGGGACCCTGCATAGGAACCA
GCTTCGGAACCTGCTCCGGAGCCTGATCCCGATGACGAAGAAGAAGAACCAGAACTTGAATAAGATGAAGAGCCGGAGCCAGAACCCGAGCCTGCACCTG
CACCAGAGCCGCCACCACCAAGGATCAATATAAAAGTTCACAAGTAATGAAAAACTAGGGTTGATGATGAGTTAGCTATCTAAGTGGTTGATAAATTTTT
TGTGAAGAGACGATGAGATGCA