CANTATAdb - search

Detailed information on CNT3085970

BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 4e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30513785	Vigna radiata	Juglans regia	29.77	35.85	84.3	223	forward
CNT30371574	Vigna radiata	Arabidopsis thaliana	34.98	50.68	80.92	262	forward
CNT30629169	Vigna radiata	Vigna unguiculata	26.3	38.55	96.45	197	forward
CNT30313614	Vigna radiata	Camelina sativa	34.98	67.53	80.53	262	forward
CNT30620828	Vigna radiata	Cajanus cajan	24.57	84.02	91.85	184	forward
CNT30174403	Vigna radiata	Vigna angularis	32.84	35.4	99.59	246	forward

Expression of CNT3085970

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MLLLLSELLLGVALQTMVGRSLEPSLGRRAAGLDRLVGIVSDMVGCLERVCENGV*

>peptide 2 (37 aa)
MYRNRNPGVMNSPQCLWSPLTIRCGSPSAPHRRPCFA*

Sequence

>CNT3085970
GAAGAAAGAAAAAAAAGCAAAGTGAATAATAATGAGGGAGGAAAAAAAAGCACAGAAATCGAAAGCGAGAGAGAGTGAAGAAGGGACCTTGGGAAGGGAA
TGAATTGGGCTAAACATCCTTGGCAATGAGGTCACCGTTGATGAGCTCTCTGTAGGCAGCAACGGGCCAACTGAACCCCCGGAAGAGCAAGCGAGAGGCG
AGAGGAACGTCGATGATGATCTCCTTCATCGTCGGTTTTTTCTCATCCCTGATGGCAATAAGGTAGCTCCGACCCACCCACCCGATCCACCCGGCGATGT
ACAGGAATAGGAACCCAGGAGTGATGAACTCGCCCCAGTGCCTCTGGTCCCCGCTCACGATCAGGTGCGGTAGCCCGTCGGCGCCGCACAGAAGACCCTG
CTTCGCGTAGTTGTCGAACCGCCGCTTCGCCTTCAGATCGGAGGATATGTTGTTGTTGTTGTCGGAGTTGTTGTTGGGAGTAGCACTGCAGACGATGGTG
GGGCGCAGTTTGGAGCCTAGTTTGGGGCGGAGGGCGGCAGGCTTGGATAGATTGGTGGGAATTGTGAGCGACATGGTTGGATGTTTGGAAAGGGTGTGTG
AGAATGGAGTGTAGGGTGGTAAGAGAAGTAAGAAAGGTTTTTAGATTCTGATAGAGGCAGATTGGTGGTTGTTAACTAAGGAGAGTGTTGTGGATTGTGG
ATAAGGTGAGGAAAGTGAAGAAGCTGAGTTGGATTCTCGTTATTGGTTC