CANTATAdb - search

Detailed information on CNT3085936

BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 1e-179

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30500417	Vigna radiata	Coffea canephora	53.44	57.4	81.31	1156	forward
CNT3020367	Vigna radiata	Citrullus lanatus	40.22	77.47	81.61	870	forward
CNT30626005	Vigna radiata	Daucus carota	52.33	34.17	81.36	1132	forward
CNT3028051	Vigna radiata	Theobroma cacao	52.89	93.85	82.34	1144	forward
CNT30174484	Vigna radiata	Vigna angularis	18.31	80.98	94.7	396	forward

Expression of CNT3085936

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVKVFTKICMPPRSLKTKCKVDSFCML*

>peptide 2 (50 aa)
MPSLSWIFALTLSMVSELSTSKVMVFPVKVFTKICIPPLNRSTKWRVDSF*

>peptide 3 (33 aa)
MRFNEKTEKKKERRERYLENRTGVLRLGFEIIA*

>peptide 4 (42 aa)
MYMGSLANNKPITESIRPQTLVQTTKSSPHKRLKIIESQTLN*

Sequence

>CNT3085936
GATGCAAATTTCTAAAAGTAATTTGTGAAACGAGAAAGATATTTTTTTATTTGACTTGAAGAACACACGAGTTCAGGGGATCAGTTTAAAAACATAACAG
CAGTTCATACACAATCTATTGATCAAAAGTTAAACGAAACAACAGTTGGTGAAAATTGAAAAACTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTGGAG
GGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAGGTACGACCATCTTCCAATTGCTTCCCGGCAAAAATAAGCCTCTGTTGATCTGGTGGTATGCCCTCC
TTGTCCTGAATCTTTGTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAAGGTAATTGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCATTC
CACCACGAAGCCTCAACACCAAGTGTAGAGTGGATTCCTTCTGGATGTTATAATCTGCAAGGGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAG
TCTCTGCTGGTCCGGTGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTTACATTGTCAATAGTGTCAGAGCTTTCAACCTCCAGAGTTATGGTTTTCCCG
GTTAAAGTCTTCACAAAAATCTGCATGCCACCACGAAGCCTCAAAACCAAGTGCAAAGTGGATTCTTTCTGTATGTTATAATCCGCAAGGGTCCTTCCGT
CTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGGGGTATACCCTCCTTATCCTGAATCTTTGTTTTCACATTGTCAATTGTATCTGAACT
CTCCACTTCCAAGGTTATGGTCTTTCCTGTCAAAGTCTTGACAAAAATTTGCATACCACCTCTCAAACGAAGCACCAAGTGAAGGGTTGACTCCTTCTGA
ATATTGTAATCAGCAAGGGTCCTTCCATCCTCAAGTTGTTTACCAGCAAAAATAAGCCTCTGTTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTCG
CCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTCAAAGTCTTTACAAAAATCTGCATACCACCCCTCAACCGAAG
CACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCCAGGGTTCTCCCATCCTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCCGGA
GGGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTTATGGTCTTGCCAGTCAAAGTTTTCACAA
AGATCTGCATCTGTTCAATCAGAAAATAAACCATCAATAACATAGATATGTAGGCATAGTTCAACCACATACTCTAGCCTCAGAAATGACAAAAGAGTTC
AAATAACAAACCCCTAATTATAAACCGAGGATGTATATGGGAAGTTTGGCTAACAACAAACCTATTACAGAATCTATCAGACCACAAACTCTAGTTCAAA
CCACAAAATCCAGCCCCCATAAACGACTGAAAATAATTGAATCACAAACCCTAAATTAAAAACCGAGAATGTATACGGGACATTTTGCAGGAAACAAACA
GAGTGCAGACCCTATCAGACCACAAACCACAGGTCCTTAAAAATTATAAAAACAAATTTAGTCACAAACCCTAATTAAGACCGAAAAAGTATTGCATAAA
ACAAACGGATTAAAGAACAAGAAAAAGTGACATTATTAATTCTAGTTCCACGACAAAAAAAAATCAACCAACAAATATTAACTTAACTAAAAGATCCAAA
CGTGGATATGATCAACGAAGAAGACCCAACATATAACTCAATAAACTGAGACTAATCAGAATGCGATTTAATGAAAAAACTGAGAAAAAAAAGGAGAGAA
GAGAAAGGTACCTTGAGAATAGAACAGGAGTTTTGAGATTGGGATTTGAGATTATAGCGTAGGATATATGCGAAGAAAGATGACGAAGGAGTAGTATTTA
TAATGTGATTGCGCTTACTGAAAGACGAAATTATCAACGGACTAACTAATAATAATGTGCCACGTGTATGGTTGTTGAGAATTATACGGCCAGATAAGCA
TTACTTCATGGATTACGTTTCCTTCTACATTAATCTGGCAGATTCTATATTTTGTTCCTGATA