Detailed information on CNT3085870


BLAST search results

BLAST vs Swiss-Prot:
sp|P25794|PIP2_PEA, E-value = 2e-65

BLAST vs NONCODE:
NONMTRT001381, E-value = 5e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693215Vigna radiataOryza sativa21.8715.0785.4296forward
CNT30546615Vigna radiataIpomoea triloba25.0640.8985.45110forward
CNT30517286Vigna radiataJuglans regia25.2820.5987.39111forward
CNT30728378Vigna radiataCorchorus capsularis26.429.2385.34116forward
CNT30525480Vigna radiataPhaseolus vulgaris24.37582.24107forward
CNT30631135Vigna radiataVigna unguiculata67.225.1396.95295forward
CNT30502187Vigna radiataNicotiana attenuata22.782.7586100forward
CNT30711465Vigna radiataGlycine max24.8323.3492.66109forward
CNT3042748Vigna radiataPrunus dulcis14.1221.4588.7162forward
CNT30560770Vigna radiataActinidia chinensis20.7314.0689.0191forward
CNT30613102Vigna radiataArabis alpina14.1223.8587.162forward
CNT30595656Vigna radiataOryza meridionalis17.7723.3584.6278forward
CNT30704968Vigna radiataPrunus avium24.611.9784.26108forward
CNT30644102Vigna radiataCannabis sativa28.2528.5183.87124forward
CNT3024898Vigna radiataPopulus trichocarpa20.7317.5785.7191forward
CNT30118191Vigna radiataCitrus clementina20.058.4787.588forward
CNT30112149Vigna radiataFicus carica20.9611.7284.7892forward
CNT3050399Vigna radiataCucumis sativus25.0612.0584.55110forward
CNT3039904Vigna radiataMarchantia polymorpha22.325.8284.6998forward

Expression of CNT3085870

Peptides detected in this lncRNA

>peptide 1 (30 aa)
SQPRSLLKMMAAPRLRAGLIPVPVIGMVAK*

>peptide 2 (40 aa)
VPAKVFVEDDGSAETTSRVDTGSGDRDGGQVNQEHGEPNW*

Sequence

>CNT3085870
GTCCCAGCCAAGGTCTTTGTTGAAGATGATGGCAGCGCCGAGACTACGAGCAGGGTTGATACCGGTTCCGGTGATCGGGATGGTGGCCAAGTGAACCAAG
AACACGGCGAACCCAATTGGTAAAGGGAGACGCTTACGGGGACGTGAGAGTCTCTGGCGCTACGTTTGGCATCGGTGGCTGAGAAAACGGTGTAAACAAG
GACAAAGGTGCCAACGATTTCAGCACCGAGTCCGTCACCTTTTGTGTAACCTGGGTTAACAAAGTTGGCACCACCGTTCAATGCACCGTATCTGGTTTTT
CCCTCGAAACCCTTCACCACTCCGGCTCCAGCGATAGCACCCAACACTTGCATCACGATGTAGAACAACGCTCTGGTCAACGACAATTTCCTTGCCAAGA
ACAGCCCAAAGGTAACCGCAGGGTTTATGTGACCCCCTG