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Detailed information on CNT3085859


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30282161Vigna radiataChenopodium quinoa32.5727.9182.69156forward
CNT3021292Vigna radiataCitrullus lanatus39.2527.9884.04188forward
CNT30729011Vigna radiataCorchorus capsularis33.8224.1484.57162forward
CNT30526127Vigna radiataPhaseolus vulgaris62.8463.6493.36301forward
CNT30493761Vigna radiataOlea europaea11.6920.9791.0756forward
CNT30636709Vigna radiataCapsicum annuum37.1630.0779.21178forward
CNT30568685Vigna radiataActinidia chinensis33.1914.1883.65159forward
CNT30145974Vigna radiataMedicago truncatula33.195088.05159forward
CNT30609114Vigna radiataGossypium raimondii64.5147.6979.94309forward
CNT30625244Vigna radiataDaucus carota45.9333.4383.18220forward
CNT30571536Vigna radiataVitis vinifera36.1234.5383.24173forward
CNT30724801Vigna radiataLupinus angustifolius51.7719.8183.87248forward

Expression of CNT3085859

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MAFRLRVASSSLCPPDKKTTAGTAAGTVRCRALTVCSATTSGATFADLDPGAIDR

>peptide 2 (44 aa)
RSQTTILISKKFGCHPIPTRTSLELFSVLVVINMEALCGALSKL*

>peptide 3 (29 aa)
GVKPQYSLARNSVVTRFLPALVSNFSQYL*

Sequence

>CNT3085859
AGGAGTCAAACCACAATACTCATTAGCAAGAAATTCGGTTGTCACCCGATTCCTACCCGCACTAGTCTCGAACTTTTCTCAGTACTTGTAGTTATCAACA
TGGAGGCTCTCTGCGGCGCCCTCAGCAAGCTTTGAATCACCCTTGTAGGTTCCAAGAGTTGCCTCTGAGTTAGCCTTGGCTCTTATCAATAAGGCTTCTT
GAGCCTTCTTCACATTCTCTTCTTTTCCACCCCATGCCTTAAGGGTACTCTGTTGAAGTGCCCTTCCAAAAGAGAAAGAGAGTGTCCATGGCTTCTTCCC
CTTAATCTGGTTGATGGCATTCAGGTTGAGGGTTGCCTCCTCCTCGCTCTGTCCACCAGACAAGAAAACTACAGCAGGAACTGCAGCAGGTACAGTTCGC
TGCAGGGCTCTAACAGTGTGTTCAGCAACCACTTCAGGAGCAACCTTTGCAGATTTAGATCCAGGTGCTATAGATCGGA