Detailed information on CNT3085653


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 5e-104

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701990Vigna radiataQuercus lobata24.4284.0877.19491forward
CNT30501297Vigna radiataCoffea canephora4.7723.1382.2996forward

Expression of CNT3085653

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MQCELSTSFYPQSRNLQLPLHNHYQMNSFKIV*

>peptide 2 (52 aa)
MSPSSISTTLFIDGRSFGFNCIHQSATIIIFFTISFSSSXKSFIXXSSSXXI*

>peptide 3 (51 aa)
MVPLAAVIXTMLLXIGYNFANPKSEXFGMKXSSNKMLWGXISKCKICISXP*

>peptide 4 (42 aa)
MGFXIKMQNLHLTXMMEISNSTSYSNRYLIYFFIAKIYIFIS*

>peptide 5 (39 aa)
MRTLNLFLPAIPQPAITFTQSLPDEFFQNCLDRTGGLIL*

>peptide 6 (38 aa)
MDDPLVLTVYTKVQLLSFSLLLAFPLXSNPLYXXLPLX*

>peptide 7 (33 aa)
MKERFNKIVKQYRFISSKSYKPIPNTRKFNNLQ*

>peptide 8 (30 aa)
MILIFNPRSCPLFMSLLNPKETLQVKRERV*

Sequence

>CNT3085653
TATGAAAGAACGCTTCAATAAAATAGTAAAACAATACCGTTTCATAAGTTCAAAGAGTTACAAACCAATTCCAAACACTAGGAAATTCAACAACTTGCAA
TGATCTTAATATTCAATCCTAGGAGTTGTCCATTATTCATGTCTCTTTTAAACCCTAAGGAAACATTACAAGTGAAGAGAGAGAGAGTCTAAAGCTTCAT
TGTGAAGTTTTCTTCGCATGGCTCAATCACTCCTTTCTCTAATTGAGTTCTGGAAGCAAAATTTGAATCTTATTGAAACTGCTTTTTAGTTGCTCAACCT
GTGATTCTAGGACTCTCAAGTTGTTGTACCACACATGTTCATATCCTGATGCTTTTAGTAAATTCTAAGTAAAAGGGTGTAAAATCCCCAATATACGCAA
TATAATCAATCAATATAAGTGCTAAAATGCATGTAAATTATAGGTAAAATGAACACTTATCATTTGATTAGCATGTACCTATTGTGATTATAACTAAACT
TTTGGTTGAGTTTCGTTCGACTTGTGTTTTGCAGATGGATTGACCATTTGACCGAGTTGTAAGTGATTGTCTTTGATCATGTTGTACTTAGTATTACCTT
CATCTTTTGAAAGAGCTCCGAGTGTTATCTTAGGATTGAAGTAATTTACTTTACATGCATTAATAAGGAGTTGCACTGTACTACAGAAAGCATACTATTT
AAAAGATATTTACATCTATTATTCAAATAACAGGTACAATAAAAGTGCAGCAGCAGTAGAATTGTAGATATCAAAACATATTTATCATTAATTAAAGAAC
TACAAATATAACATTTCACCTGATTCTCCTTTTTCTTATTTTTCACCAATGCAATGCGAACTCTCAACCTCTTTTTACCCGCAATCCCGCAACCTGCAAT
TACCTTTACACAATCACTACCAGATGAATTCTTTCAAAATTGTTTAGATAGAACTGGCGGTTTGATCCTCTAAACTCATTTCATCAGGAAATAAAGTAGG
TTTTGGAGGTATTTCCAAATCTTCAATGTCTCCTTCAAGCATTTCCACTACTCTATTCATTGATGGACGATCCTTTGGTTTTAACTGTATACACCAAAGT
GCAACTATTATCATTTTCTTTACTATTAGCTTTTCCTCTTCGNTCAAATCCTTTATATCNANATCTTCCTCTTNTNTAATATGATTATATATCCAAAGGG
GAAAATAAAGTTGACTTGAGTGTTCTGCATGGGGATTTAGNTTNTTCCTCTTGCTNGCCATCTCCATCAACAACATTCCNAAACTATANACATCAGCTTT
GTGNGATATTCCTCCAATATTATTGTAAAACAATTCTGGAGCCATATATCCAATGGTTCCTCTTGCTGCTGTCATTGTNACAATGCTATTATNTATTGGA
TATAACTTTGCTAATCCAAAGTCAGAAANNTTTGGGATGAAGTTNTCATCCAATAAGATGTTATGGGGTTTNATATCAAAATGCAAAATCTGCATCTCAC
ANCCATGATGGAGATAAGCAATTCCACGAGCTACTCCAATCGATATCTTATATATTTTTTCATAGCTAAAATCTATATTTTCATTTCCTGAAAATATAAA
TTTATCAAGAGATCCATTGGGCATGAATTCATAAACAAGAGCGCGCTTNGAGCCACTAACACAAAATCCAATTAATTGAACCACATTTTGGTGATGTATT
CTTCCAATAGTTGCAACTTCATTGATAAAATCTTGTCCATTTCCTTTGGCTTTACCTAATATTTTGATTGCCACAGAAGGTCCACTGCGTAACTTTGCCT
TAAACACACAGCCAAATCCTCCTTGACCTAACTTCTCTTTGAAACCTTCAGTCATCTTCTTAATTTCCTTGTATGAGTATCTGATAGGTGCTAAGTGATT
TTGTTCAAGGTAATTTTCAATATTTTCATACATTGATGAATGTCTTTTCCTCCATTTACATATGAAAATCACAATTAGGAATGGCAATCCAAACAAAATT
TTGTAGGCCCA