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Detailed information on CNT3085638


BLAST search results

BLAST vs Swiss-Prot:
sp|O80339|ERF82_ARATH, E-value = 1e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692625Vigna radiataOryza sativa2.3126.4688.1459forward
CNT30214766Vigna radiataHelianthus annuus5.3625.7583.21137forward

Expression of CNT3085638

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MLSPSSTTEEEESQSLWQSSGTRGGVRGYLRVVVKNGAVEAPAAVGGRGPLKDSTVLLMPLEVGL*

>peptide 2 (32 aa)
HHTIYTIHFLIFKNYRLKKTTNLQRVFLAYRD*

>peptide 3 (43 aa)
MILAYPYVMKTKTPTISVPSRCVTFISVSGVGLCNNTPFFLSS*

Sequence

>CNT3085638
CACCACACGATTTATACAATACACTTTCTAATTTTCAAAAACTATCGTCTTAAAAAGACGACAAATCTCCAAAGAGTTTTTCTTGCTTATCGTGATTAAA
GCGTAACAAAATTTCTTTCAGCTCGGTTTTTTAAAAAAAAAGCTCAAAAATGGCAGTAATAATTTTCTTTATTTGAATGAAAGGTGGTGAATCGGTGATG
TATGAAATGATGAGGGTAAGGTGAAGAGCAGCGCGGATGGGTGATCTCACACGGTGAGTGCGTGTTTAAGCTGGCATTGGTTGAAGCGTTGACTTTTCAT
AAACCTTTGATTTTCTTCTAACATTACATCTTATGATATTAGCGTATCCCTATGTAATGAAAACAAAAACACCTACCATCTCCGTGCCTTCTAGATGTGT
CACGTTCATTTCAGTGAGTGGGGTAGGACTCTGTAACAATACCCCATTTTTTCTTTCTTCCTAAACACCTTCCAACACCACCTTTGCCTCACCATGGTTC
CATCACAGGACAAGCTGACCTAACGCGGCCTCCCCATTCAAACTTCTAACACCCTATTCCACTGTCCTTCTTTTCAGACCACGAAAATTTCTACACCTTT
TTTTCTTTTTCTTATCCTACCCGTAACGATATGCTGAAATTTAGCGATATGCTGTGGCTTCACTAAAACAAAATCGTTAATCCACGTATTGATTCTTTTC
TTACACAACCCAAAATACGACGTTACAACATCAGGGTTTGCGAGAAAGGCCAGCGGCACAGATGAAAGCAAAAAGGAAACCATATTTCTCCCTCCTCATC
TAATCATTCACACCTAGATCCAAACAGCTTGAGCGTCATCGGAGGCAAAATCATAGTTATTTTCCCTTTTGCAATTCCTCCCAAAACAAGAAAAGGTAAA
ACAACAAATTATCACTCTCCCAACGAACTTTCTTCCAAACCTCGTAAAGGTAATAAGGAAGAAAAAAAAAAAAAAAAAAAAAACATAACATAGCCCTACG
CTACTCCAAAGGCCACCATACAAAATTTAATTCAATGGGTGCCTTTCATGATTGCTAACATTGGAAATCCACCAAAACAAAAGGAAACTAGAACGAACTG
AGTCTAAGTTAGAGCAACACTGAATCTCTGATATAGTACTACAATACACACCGTTGAGACAGAGAGAAAGAGATTCTGGGAACAATGCATACACACCGGC
ATTAATCTTTCAACAACAGAAGATATCATAATTCATAATTACTTTTTTTTTTTTCTCATTCAATATTTCCTCCTAAATAAAATTTTAGAAAGAGAAAATA
CACCCAATCACGGAATCTCCCTCTCACAGAACTAAGATCATATTGCCACAATCTTACATCTGATCATCATTATAATTTGTTCCGCGCAACAATAACAAAA
AATCAAGGGTGAAAAAAAATCAGAAATTTAAAACCATCACAGCACGTTCAGAGGCAGAGCGCGGTGCAGCGGAGATCGTCATCGGTAGCGGCATCGTCGA
ACGGCGGCGCGTTGAGATCAAAAGGCAGGGGAGGGCGGAACGACGAGGAGACGATGTTGTCACCGTCGTCGACGACGGAGGAGGAAGAGTCGCAGTCGCT
GTGGCAGTCTTCGGGGACGAGAGGGGGAGTGCGCGGGTATCTCCGCGTGGTGGTCAAAAACGGCGCCGTGGAAGCGCCGGCGGCTGTGGGAGGGCGTGGC
CCGCTGAAGGACTCGACGGTGCTACTCATGCCACTTGAGGTGGGTCTCTGAGGGTTGTTAAGGTTGCTGATGTGGTTGCTGTCGTTGAAACCCGCGTAGA
AGAGAGGACTGGTGGTGGGGTGCGGATAGCAGAAAGGGTGTGAAAGAGGGAAATTTGTTTTGGCCTTGGGACCCCGGAGAGTCCGTGCGGCGGCGTCGTA
GGCTCGAGCAGCTTCCTCGGCAGAATCGAAGGTTCCCAACCAAACCCTGGCTTTCTTCAACGGGTCTCTGATCTCCGCCGCGAACCTCCCCCACGGTCTC
TTTCTCACGCCCCGGTACCGAGGCTCCTTTAAAAGGGATCCGTTGGCGGCCGCAGCCGCCGCCGTGACCACGGACGCCGCCCCTCCTCTTCCCTTCCGCA
TCTCTTCGGAGAAATCAATAAAAAAATAAGAAAAAAAGACAGACACCCAAGTTCGTCCTACACAACAAGGTTCGATCTTGGACTGGGTCTCAGAGAAACA
TGTAAGGATGTGTTTGTGTGTGTGTGTGATATTAATGGGTTTTTCACAAGTGGTGAATGAGTGCTATGGAGGAGGAAGAAGAGGTATAAGATGATGATGA
GGACCAGAATAAGAGAGAGAAAGAAGAGAGAGAATTGAAGGCGGTACCACCTTCTCTTCTTCTTCTTCTCCTTCAACTACACACTAACACAAAATATAAT
ATTAATATTAATATTAATACTAATATTAAGCGTGTTTCTCTTCGCGTTTTTCTTCCCTCTTTTCGTATTACCTTTTTTTTTATTATTTTATTATTATTAT
TATCATTATTATTTTCTCCTCGAACTGACCTCTTGTCTTGCTTTCTTTATCCCCTC