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Detailed information on CNT3085543

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30201416	Vigna radiata	Pisum sativum	22.58	39.8	89.92	119	reverse complement
CNT30612419	Vigna radiata	Arabis alpina	12.14	30.19	85.94	64	reverse complement
CNT30646316	Vigna radiata	Cannabis sativa	40.8	56.43	83.72	215	reverse complement

Expression of CNT3085543

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MVQGARTRSDSWQASSGRGTWTNRTYTGMRGIWRLYRYGTIQLKDSLKELIWQLISPNAFAFR*

>peptide 2 (53 aa)
CDTRALTRAGSDRRCKRHGAGGTDKERLLAGFEWKGHMDESNIHRNERDLETV*

Sequence

>CNT3085543
TGTGACACCCGGGCACTGACGAGGGCGGGGAGTGATCGCCGGTGCAAGAGGCATGGTGCAGGGGGCACGGACAAGGAGCGACTCCTGGCAGGCTTCGAGT
GGAAGGGGCACATGGACGAATCGAACATACACCGGAATGAGAGGGATCTGGAGACTGTATAGGTATGGGACTATACAGTTGAAGGATAGCTTAAAGGAAT
TGATTTGGCAACTCATATCACCAAATGCATTTGCTTTTCGGTAGCCTAACCCATAAGAACTCCATAGTTAAGCGTGCTTAACTTGGAGAAATTCTGGGAT
GGGTGACCTTCTGGGAAGTTTTCCCGGAAAGTGTGTGAGTGAGGACAAAGCACACTGGAAAGCGTCGTGGTGATCTGTGGGATGGCAGTCAACATTCCTG
CGAGTTGCCGGGACGTTACAGGTGTTGTGATTTGCACGTCAATATGTTTACAGAAATTTTGGAGATGATGTGTATTGGAATGTCCACCTTTTGTATTCTT
TTATTTAAAATTAAAAAGAGAATTAAG