Detailed information on CNT3085382


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30620725Vigna radiataCajanus cajan22.0935.9282.41199forward

Expression of CNT3085382

Peptides detected in this lncRNA

>peptide 1 (33 aa)
IEKTLFERRKGTETKTDRKCKGKINKNALIINQ*

>peptide 2 (36 aa)
MREERVVVFIVLGNACGPQENVDRCVVKTMCGVNER*

>peptide 3 (35 aa)
MNEGREGGGIYSVGKCVWAPGKRGQVCGEDDVRCE*

>peptide 4 (36 aa)
MASIERTTEAPITAMELETDPAAPASGPGAGAGDRS*

>peptide 5 (87 aa)
MSEMPWLERVWREKENRIQRCNEALSWCGGRRQILSGGDGEEKCRNESQEEGVDGECLRCHDSKKRREKENEETGVEGAVSFRFILQ*

Sequence

>CNT3085382
TGATTGAAAAAACACTATTCGAAAGAAGAAAAGGAACAGAAACAAAAACCGATAGAAAATGCAAAGGTAAAATTAATAAAAACGCATTAATAATAAATCA
ATAATAATATTATTTATTAGTAAAGAATACAAAAATAACTTCTTATTCCTCACTAACACCTAAAATAAATAATTCGGTATATAAATTCTGTAAAATCTCT
TTCTCTCTGTTATACATGAACAGTATAAATCAACAAACAAATCAATACTTTCCACATGGAATCAAGGAAAATTCAGAATCATCAGATTAATTCAGTGCTT
GAAGATGGCGAGCATTGAAAGAACAACCGAAGCTCCAATCACGGCCATGGAGCTGGAAACGGATCCGGCAGCTCCGGCGTCGGGTCCTGGTGCGGGTGCC
GGCGACAGATCTTGAGCGGAGGCGACGGCAAAGAAAAGAGCCACGACGAGCACGACGGCGAAGGAGAATGTCTGAGATGCCATGGCTAGAGAGAGTTTGG
AGAGAGAAAGAGAATAGAATTCAAAGGTGTAATGAGGCTCTGTCCTGGTGCGGGGGCCGGAGACAGATCTTGAGCGGTGGCGACGGCGAAGAAAAGTGCC
GCAACGAGAGCCAAGAGGAAGGCGTTGACGGAGAATGCTTGAGATGCCATGACTCGAAAAAGCGTAGAGAGAAAGAGAACGAAGAAACAGGCGTTGAAGG
TGCTGTGAGCTTTAGGTTTATTTTGCAATGAATGAGGGAAGAGAGGGTGGTGGTATTTATAGTGTTGGGAAATGCGTGTGGGCCCCAGGAAAACGTGGAC
AGGTGTGTGGTGAAGACGATGTGCGGTGTGAATGAACGGTAGAGAGTTGGTGAGAGAGACTGTTCTTTACGTTTCATTGCTTTTTCGGTCTGAAAGATTC
A