Detailed information on CNT3085348


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532211Vigna radiataEucalyptus grandis64.5224.591.88160reverse complement
CNT30195107Vigna radiataPisum sativum24.1913.8288.3360forward
CNT30559395Vigna radiataActinidia chinensis59.688.3185.14148reverse complement
CNT30239222Vigna radiataBrassica oleracea62.127.383.77154forward
CNT30218750Vigna radiataKalanchoe fedtschenkoi28.236.0191.4370forward
CNT3058323Vigna radiataAmborella trichopoda63.3116.685.99157forward
CNT30321935Vigna radiataAsparagus officinalis20.562.494.1251reverse complement

Expression of CNT3085348

Peptides detected in this lncRNA

>peptide 1 (44 aa)
YLVERFYTFDLSQGIFVDKNSVFSFFRMXNISQNMECESNPCLN*

Sequence

>CNT3085348
TATCTTGTTGAAAGGTTCTATACATTTGACCTTTCTCAAGGCATTTTTGTAGACAAGAACTCCGTTTTTTCCTTTTTTCGGATGNGAAATATTTCTCAGA
ACATGGAGTGTGAATCCAACCCATGTTTGAATTGAAATTGAGATACTGATACAAGTTCTTCCCTTNTGAATCAGGTATATTCATATCTGAAAGCGGTTGA
CAATAAGTTTTTTCAAAATGGACTATTTATCCCTCTGTTAGAGGTGTT