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Detailed information on CNT3085218

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30631206	Vigna radiata	Vigna unguiculata	20.35	36.3	86.09	151	forward
CNT30708805	Vigna radiata	Glycine max	20.62	28.65	93.46	153	forward
CNT30620999	Vigna radiata	Cajanus cajan	22.1	10.85	91.46	164	forward
CNT30176294	Vigna radiata	Vigna angularis	24.93	59.11	98.92	185	forward

Expression of CNT3085218

Peptides detected in this lncRNA

>peptide 1 (35 aa)
FVGFRGMPTCFMGMGLVPRKLRVLGFCWCWVWVWI*

>peptide 2 (45 aa)
RRLQRHAHVLHGDGFGPEEVEGVGILLVLGLGLDLSLDLRDLRGG*

>peptide 3 (48 aa)
MKEISNRQPPRSCGLNIRLNFEGSKITLLASFKGKKKNGGQGDQNFTS*

>peptide 4 (51 aa)
MGGKGIKILQANFDSKTWISFLKTPGFREILLSLLLGELKDKPKNLSLKDR*

Sequence

>CNT3085218
TTCGTAGGCTTCAGAGGCATGCCCACGTGCTTCATGGGGATGGGTTTGGTCCCGAGGAAGTTGAGGGTGTTGGGATTCTGCTGGTGCTGGGTCTGGGTCT
GGATTTGAGCCTGGATCTGAGAGATCTGAGAGGGGGTTAGGTGGTTGAGGAAGAAAAGGAAGGGGTTGAGGAAGGACTTTTCATAAAAGGTTCAAGAACT
TCCATTAGTTCACCCCTGAACGGATCTGAGGGAAGTTGAAACTCTGTGCTGCTGTAAAAACCCATCATAGCTGCCATCAGATCAATTCAACCTGCGTCTT
TCTAAAACTGAAGAACAACTGGTTAATTAATACAGAGGATCTCAAAAACAAAGATAACTAAAAAGAAAAACCTTTTTCTACAAACAAAGGATGAAGGAGA
TTTCAAATAGACAACCTCCTCGGTCCTGTGGTCTTAATATAAGATTAAACTTCGAGGGATCAAAAATAACCCTCTTGGCTAGTTTCAAAGGCAAAAAAAA
AAATGGGGGGCAAGGGGATCAAAATTTTACAAGCTAATTTTGACAGTAAAACCTGGATCTCGTTTCTGAAAACACCTGGCTTTCGAGAAATACTTCTAAG
TTTGCTTCTTGGTGAGTTAAAAGACAAACCCAAAAATCTTAGTTTGAAAGACAGATGATTAACAGAAAGGGATTCAGAGAAGCGGGGTGTTGCAGAGAGG
GGGGAGAAGGAGAAGAAAGATGAACCACAGAAGACTGAAAGC