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Detailed information on CNT3084965


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526385Vigna radiataPhaseolus vulgaris35.7757.4283.75240forward
CNT30631283Vigna radiataVigna unguiculata46.9445.9981.27315forward
CNT30709952Vigna radiataGlycine max15.0521.1787.13101reverse complement
CNT30175177Vigna radiataVigna angularis21.9117.7894.56147forward

Expression of CNT3084965

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MNRRFILRFMHGWFSIWWLVNRWLLNRWLVNWWLSVRWLVNWWFLNWGFVNWWFLNGGLVIVSKPLRGQNQNCKKQN*

>peptide 2 (46 aa)
MVACEPVVAQPVACKLVAFRTVACKLVVSQLGVCKLVVSQWGACHS*

>peptide 3 (36 aa)
SVSDISPNKLFQTHPSTYPKHIMIVFKEGTTIGLII*

Sequence

>CNT3084965
GAAGTGTAAGTGACATAAGTCCAAATAAACTCTTTCAAACGCACCCTTCGACTTATCCCAAACATATTATGATAGTTTTTAAGGAAGGAACCACGATAGG
ATTAATAATATAAAGTTCTATATATAATTCATAGTCTGGAACAAAGCAGTGATTCTCGGTTCTACATTATGCATCCATGATAGTATTACCATGGCCATAA
CATGGCAAAGAAATGCTTGAAATGAAGAACTACGAGTAATCCTTGCCAGAATATGTAAACTAAACTATAACATGAAAATGGCAGCGGTTACACCTCTTAT
TTTCTGCATATAATTAAAACAGCATTATCAGAACATCACAGGTGGGTGCCTCAGTTGGAAACAGGAGGGTACTTAGGGTGTGGTGGCTTGTAAACTGGTG
GGGACTTATGAATAGGAGGTTTATATTGAGATTCATGCACGGGTGGTTTTCCATATGGTGGCTTGTGAACCGGTGGTTGCTCAACCGGTGGCTTGTAAAC
TGGTGGCTTTCCGTACGGTGGCTTGTAAACTGGTGGTTTCTCAACTGGGGGTTTGTAAACTGGTGGTTTCTCAATGGGGGGCTTGTCATAGTTAGCAAGC
CCTTGAGGGGACAGAACCAGAACTGCAAGAAGCAGAACTAGGGAGCTTAAGGAAGCCATGTTGTTGATGTT