Detailed information on CNT3084947


BLAST search results

BLAST vs Swiss-Prot:
sp|D2CZZ9|BNM2C_BRANA, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526413Vigna radiataPhaseolus vulgaris28.9136.6192.23283forward
CNT30631441Vigna radiataVigna unguiculata17.6742.5192.49173forward
CNT30570403Vigna radiataVitis vinifera32.3841.4478.55317forward

Expression of CNT3084947

Peptides detected in this lncRNA

>peptide 1 (35 aa)
CNGVLLQPRFFLNFCGQNHKVFSKLGSAEINHGLK*

>peptide 2 (36 aa)
MKNISDSFWNWCIRKHRLPVNFRRQSTMGCHHCKLQ*

>peptide 3 (95 aa)
AMVYCCNPVSFSTSVDKTTRFFPSLEVLKSTMDSSEVAQYFSSPLILVSSHXLRVFFTALASSDSGLMENLVKTSFTLLDEKGIESATWRGKKVA*

>peptide 4 (88 aa)
MKRVLNLQLGVARRWLDRNSSWFNLEHLKGQMFGVPLRCVSVAHCHSFNSDPVSTLQRHRVSSGGLSFVAVKNSIRIILLVAHNSFIS*

>peptide 5 (75 aa)
MVYCCNPVSLSTSVDKTTRFFPSLEVLKSTMDSSEVAQYFSSPLILVSSHSLRVFFTALASSDSGLMENLDEEHQ*

Sequence

>CNT3084947
GTGCAATGGTGTATTGCTGCAACCCCGTTTCTTTCTCAACTTCTGTGGACAAAACCACAAGGTTTTTTCCAAGCTTGGAAGTGCTGAAATCAACCATGGA
CTCAAGTGAAGTGGCACAGTACTTTTCCTCACCCTTGATACTGGTTTCTTCACATTCNCTAAGAGTGTTCTTCACTGCATTAGCCTCCTCTGACTCGGGT
TTGATGGAAAACTTGGTGAAGACATCGTTCACCTTGCTGGATGAAAAGGGTATTGAATCTGCAACTTGGCGTGGCAAGAAGGTGGCTTGACAGGAACAGT
TCCTGGTTTAACCTTGAGCACTTGAAAGGCCAAATGTTTGGGGTTCCATTGCGATGTGTCAGTGTGGCACACTGCCACAGCTTTAACTCTGATCCCGTTA
GCACCCTCCAAAGGCACAGAGTAAGTTCTGGTGGTCTCAGTTTTGTGGCAGTAAAAAACAGCATAAGGATAATTCTGCTTGTGGCACACAACAGCTTTAT
CTCCTGATATCTTCTTCACTCCTGGTGCTATGGTGTATTGCTGCAACCCCGTTTCTTTGTCAACTTCTGTGGATAAAACCACAAGGTTTTTTCCAAGCTT
GGAAGTGCTGAAATCAACCATGGACTCAAGTGAAGTGGCACAGTACTTTTCCTCACCCTTGATACTGGTTTCTTCACATTCACTAAGAGTGTTCTTCACT
GCATTAGCCTCCTCTGACTCGGGTTTGATGGAAAATTTGGATGAAGAACATCAGTGACAGCTTTTGGAATTGGTGTATTAGGAAGCACCGACTTCCAGTA
AACTTCAGGAGGCAAAGCACCATGGGTTGCCACCACTGCAAGCTGCAATAAAGCAAAAATGGGAAGGAGAAGATTTTCCATGTTGAGCTTTGTATCTTAG
AGAGAAAAAGTGTGGTGAATGTAAGGAAAGGTGAAGAGAAGTGTGTTGGATAAGAGTATATTTATATGCATAAATAAAT