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Detailed information on CNT3084857


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 3e-88

BLAST vs NONCODE:
NONBRAT001321, E-value = 7e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676109Vigna radiataSetaria viridis8.7937.3784.26108forward
CNT30315797Vigna radiataCorylus avellana30.9457.4979.47380forward
CNT30547549Vigna radiataIpomoea triloba33.3152.8483.37409forward
CNT30376827Vigna radiataArabidopsis thaliana8.0641.9582.8399forward
CNT30709007Vigna radiataGlycine max16.8686.9786.96207forward
CNT30178172Vigna radiataSecale cereale27.7762.1179.47341forward
CNT30591253Vigna radiataMusa acuminata5.5421.7989.7168forward
CNT30441386Vigna radiataAegilops tauschii18.7347.9281.3230forward
CNT30254117Vigna radiataAvena sativa19.7945.0882.3243forward
CNT30613891Vigna radiataArabis alpina15.0745.9181.08185forward
CNT30464179Vigna radiataSaccharum spontaneum9.5323.9882.91117forward
CNT30140729Vigna radiataLolium perenne28.9965.9380.62356forward
CNT306284Vigna radiataZea mays4.425.2390.7454forward
CNT30609694Vigna radiataGossypium raimondii33.3153.3980.93409forward
CNT30719922Vigna radiataTriticum spelta13.8428.7683.53170forward
CNT30368649Vigna radiataSorghum bicolor16.6148.5782.84204forward
CNT30596369Vigna radiataOryza meridionalis4.7220.7987.9358forward
CNT3022780Vigna radiataPopulus trichocarpa8.8844.1382.57109forward
CNT30329187Vigna radiataDioscorea rotundata10.533.2583.72129forward
CNT30114434Vigna radiataEutrema salsugineum7.7423.8783.1695forward
CNT3018856Vigna radiataCyanidioschyzon merolae5.2928.2686.1565forward

Expression of CNT3084857

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MGRETNGCKCFKVGALGSRSVAQIVTNGAFSFPCIIKLEAKFLEVAILFFMSEIIWNL

>peptide 2 (33 aa)
MGMRFGRIFIDREERENGAGIWKGFSETRKGNA*

>peptide 3 (31 aa)
VNLTSIIPSNLDQYSENPHLFTQTSTTRIKL*

>peptide 4 (30 aa)
MLGKPIPDTYNINFKSISPIFHIVGKFTVQ*

Sequence

>CNT3084857
GTAAATTTAACTTCAATTATCCCTTCCAATCTTGACCAATACTCAGAAAACCCTCATCTTTTTACACAAACCAGTACCACAAGAATTAAACTTTAGACTG
AGTAAGAAATCAATGTTGGGCAAACCAATCCCTGATACATACAACATTAACTTCAAAAGCATTTCACCAATATTTCACATCGTGGGAAAATTTACAGTTC
AATGATTTCAAAATCAGTTCTTGGTCCCAAAAACATGTCCCATTGAGAATAAAGAAAAAGAGTAGTTGTTACCAAGAAAGATAAAGAAAGCATTTGGCAT
TCAAAAGATAGATTCACATTTCATATTCCACAAGGAAACAATTACACCATTCTTACAACTAAGCCAAAGGCCAAACCCAAGCCATAGCATTCAAAGGCAG
AACCCTAACCATACCCACTAAACATTTCAACAGTCTCTTTAAGCCTTTTCAAGCCCTCTCGCCTCTAATTCTACGAGCGAGTTGAATATCTTTGGGCATA
ATGGTAACCCTCTTGGCGTGAATAGCGCAGAGGTTGGTGTCCTCGAACAACCCCACAAGATAGGCTTCAGCGGCTTCTTGAAGCGCGGAAACAGCGCTAC
TCTGAAACCTCAAGTCAGTCTTGAAGTCCTGTGCAATTTCCCTCACAAGCCTCTGAAACGGAAGCTTTCGGATGAGGAGCTCGGTGCTCTTCTGGTACTT
TCTAATTTCCCTCAGCGCCACCGTCCCCGGACGGAACCTGTGAGGCTTCTTCACACCGCCAGTGGCTGGAGCGGACTTACGGGCAGCCTTCGTCGCCAGC
TGCTTACGTGGTGCCTTGCCTCCGGTGGACTTGCGAGCTGTCTGCTTTGTACGAGCCATGTCGAGAAGAGATTCGACGGAGAAAGTGTAAGAAATTGGGA
ATTTTAAACTCTGAAGAAAGCGAAGGAAATTGCAGTGGGTGGGTATGGGAATGAGATTTGGGAGAATATTTATAGACCGAGAGGAAAGAGAGAATGGCGC
GGGAATTTGGAAAGGGTTTTCTGAAACACGAAAAGGAAACGCGTAGCCGTTGATGGGAAGAGAAACCAACGGTTGCAAGTGCTTTAAAGTAGGGGCACTA
GGATCGCGATCCGTGGCACAGATAGTAACCAATGGGGCTTTTTCTTTTCCTTGTATCATAAAATTAGAGGCAAAGTTCCTGGAAGTAGCCATATTGTTCT
TTATGTCAGAAATTATTTGGAATTTATG