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Detailed information on CNT3084841


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09020|PR4_PHAVU, E-value = 3e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639598Vigna radiataNymphaea colorata27.7224.7982.43148forward
CNT30514302Vigna radiataJuglans regia27.5325.7485.71147forward
CNT30268023Vigna radiataChenopodium quinoa23.4125.3584.8125forward
CNT30468723Vigna radiataSaccharum spontaneum24.1615.7183.72129forward
CNT30597257Vigna radiataOryza meridionalis24.9126.6583.46133forward
CNT30371492Vigna radiataOryza glumipatula24.9124.7783.46133forward
CNT3053146Vigna radiataAmborella trichopoda26.9722.8683.33144forward
CNT30108688Vigna radiataOryza longistaminata24.9123.7183.46133forward
CNT30104475Vigna radiataOryza rufipogon24.9123.6783.46133forward
CNT30578401Vigna radiataOryza barthii24.9123.7983.46133forward
CNT30581754Vigna radiataEchinochloa crusgalli23.4116.3481.6125forward
CNT30118085Vigna radiataOryza nivara24.9124.9183.46133forward

Expression of CNT3084841

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEQKPKASENKPIMTE*

Sequence

>CNT3084841
GTAACACAAAACGGTGTCGTTGGGGTCTCGAACTAGCATAAATCTGGAATGTTGCAGAAACTGTGAAGCGCAGAGAAAGAAAGAATTAGGGTTTTCATCT
TTGCCATCAGAAAACGAAAATGATTTACGACGTTAACTCTCCACTTTTCCGATCCTTCCTTAGCCAGAAGGGTGGCTCCTCCGATAAGAGGAAAACAGAG
GAGCAGAAGCCTAAAGAGCAGAAACCCAAAGCCAGTGAGAACAAACCTATAATGACAGAGTGATAACAAGTTGTTTTCATTCGGTTGAGGAATGAAAATA
GGTTGTAGGTTGTTTTGCAGCTATGTAATTGAAGATTGTTGTGTTGTTGTTCTGAGTTACATGCTGTGATTCCAGAGTTTGTTATTGTAGTGTTTTGATT
TTTGAATATGCTTTGGAATGAAACAGTAGTGGACACAATTTGAACTCAGCCAGTATAGTGTTTATTTGAATACCTTATACTTTCGGTCATTTTGGAATAT
TTTACATAAAAAAAATATTTTAAAAGATTTGTAA