Detailed information on CNT3084783


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021646Vigna radiataCitrullus lanatus22.2918.2180140forward
CNT3045541Vigna radiataPrunus dulcis22.4512.6583.69141forward
CNT30416827Vigna radiataPapaver somniferum17.8321.9681.25112forward
CNT30643677Vigna radiataCannabis sativa17.9922.7481.42113reverse complement
CNT30332970Vigna radiataCynara cardunculus21.525.3884.44135forward

Expression of CNT3084783

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MAGLLGYRSLPPKAKNLVVAGGLTAFVFGAYFYTMRAVGGTDELQVAIDKFESDKSKKEGEANIPSKV*

>peptide 2 (68 aa)
VRYIHEGAFSALFHLHKRKSIQKSEVNRRIFFCSVRSYYLHLYQKRVIVVFVFEVLCCVEQDGWTFRI*

Sequence

>CNT3084783
GTTAGATACATTCACGAAGGTGCATTCAGCGCTCTTTTTCATCTTCACAAAAGAAAGAGTATCCAAAAAAGTGAAGTGAATCGTAGGATCTTCTTTTGTT
CCGTAAGAAGTTATTATCTGCACTTGTATCAAAAAAGGGTAATTGTGGTGTTCGTGTTTGAGGTATTGTGTTGTGTTGAGCAAGATGGCTGGACTTTTAG
GATATAGGAGCCTTCCACCCAAGGCAAAGAATTTGGTAGTTGCTGGGGGTTTGACAGCTTTTGTCTTTGGTGCCTACTTCTACACCATGAGGGCTGTTGG
AGGCACTGATGAACTGCAGGTAGCAATTGATAAGTTTGAATCTGACAAGAGCAAGAAGGAGGGTGAAGCCAACATTCCATCTAAGGTCTAAAGCTCATTC
GTTCTTGTACAACAAAACAATACTTTTGGTCTGTAATCAAGCGTTTTACTCAGCTTGAGAGTTAAAACGAAGAATGATATTTAATCTAGAGCTAATAATT
TCAACCAGCTTTATGTACAAATAATGTGTGGTAGGGAAACTATAATTGAGACCCTGTTTTGGCCTTTTTTTACTGTTTCATGATGATAATAGAAATCTGT
GATCATAGTAATACTTAAGAACAAAAAA