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Detailed information on CNT3084712


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 4e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673169Vigna radiataSetaria viridis46.2934.282.44131forward
CNT30520857Vigna radiataSetaria italica46.2913.8882.44131forward
CNT30516757Vigna radiataJuglans regia52.329.981.76148forward
CNT30376200Vigna radiataArabidopsis thaliana90.8126.6380.93257forward
CNT3021623Vigna radiataCitrullus lanatus52.310.979.73148forward
CNT30730016Vigna radiataCorchorus capsularis48.4120.6983.21137forward
CNT30629841Vigna radiataVigna unguiculata54.4226.3296.75154forward
CNT30709939Vigna radiataGlycine max98.2384.2486.33278forward
CNT3094368Vigna radiataSolanum tuberosum32.5135.5284.7892forward
CNT30182270Vigna radiataSecale cereale46.2923.7383.97131forward
CNT30292923Vigna radiataTriticum aestivum49.1260.9684.89139forward
CNT30222283Vigna radiataHordeum vulgare42.428.5784.17120forward
CNT30390478Vigna radiataTriticum turgidum46.2910.9983.97131forward
CNT30564216Vigna radiataActinidia chinensis52.366.3783.78148forward
CNT30238125Vigna radiataBrassica oleracea27.926.7484.8179forward
CNT30437582Vigna radiataAegilops tauschii42.0536.0683.19119forward
CNT30249726Vigna radiataAvena sativa46.2916.3383.21131forward
CNT304588Vigna radiataZea mays30.396.6784.8886forward
CNT30129085Vigna radiataCorymbia citriodora49.8213.3983.69141forward
CNT30683149Vigna radiataTriticum urartu46.2929.5783.21131forward
CNT30720963Vigna radiataTriticum spelta51.2426.0383.45145forward
CNT30597198Vigna radiataOryza meridionalis22.974.8586.1565forward
CNT30359901Vigna radiataLactuca sativa30.0412.5485.8885forward
CNT30154501Vigna radiataPrunus persica56.8951.683.85161forward
CNT3031830Vigna radiataTheobroma cacao53.7141.6484.87152forward
CNT3037832Vigna radiataCucumis melo52.317.5879.73148forward
CNT30556884Vigna radiataPanicum hallii46.2918.0482.44131forward
CNT30551919Vigna radiataOryza brachyantha29.685.3986.984forward
CNT3049017Vigna radiataCucumis sativus52.315.0980.41148forward

Expression of CNT3084712

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLRIATSPPAAREPAAPAYSVFLRGPALTNGPTSMPLRSGLTAVL*

Sequence

>CNT3084712
CTCGTTGAACGATGAGATCCCGTAGATTGTGAGGCAGATGCTCAGGATCGCCACAAGCCCACCGGCAGCGAGAGAGCCCGCTGCGCCAGCGTACTCGGTG
TTCCTGAGAGGGCCGGCCTTGACGAATGGGCCCACTTCGATGCCTCTGAGGAGTGGGCTGACTGCGGTCCTGTAAGCAGGGAGGTTGGAGAGGTACCAGG
CGATCAAAGGGCTGGATGTTACCGGCGTTTCGAGACTTCCGATGAATGGGTCACCGTTGATGGGCTGAATGACTTGATACGTG