Detailed information on CNT3084696


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709778Vigna radiataGlycine max51.3632.4284.96226forward

Expression of CNT3084696

Peptides detected in this lncRNA

>peptide 1 (72 aa)
SIHTPTVAVRAAREDSVATRRPLGSVVTRVSGAARMRVWSESAGRGLPCLRKRGSGFSSWRSLDLMASAARS*

>peptide 2 (40 aa)
VDPHADGGGSGGEGGFGGDSEAIRERGNARLRGSEDASVV*

>peptide 3 (57 aa)
MAVGGGGAGGEAAERDRKEESAEARRSERRAAESRRLRDMDPRWYLGFHREKRVANE*

Sequence

>CNT3084696
CGTCGATCCACACGCCGACGGTGGCGGTTCGGGCGGCGAGGGAGGATTCGGTGGCGACTCGGAGGCCATTAGGGAGCGTGGTAACGCGCGTCTCAGGGGC
AGCGAGGATGCGAGTGTGGTCTGAAAGCGCGGGGCGGGGGTTGCCGTGTTTGAGGAAGCGGGGGTCCGGGTTCTCGAGCTGGCGGAGCTTGGACTTGATG
GCCTCGGCAGCGCGGTCGTAGATCATGGCGGTGGGGGGCGGAGGTGCGGGAGGGGAGGCGGCGGAGAGAGATCGGAAGGAGGAGAGTGCGGAGGCCCGCC
GGTCGGAGCGGCGGGCCGCGGAGAGCAGGCGGTTGAGGGACATGGATCCGCGCTGGTATCTAGGGTTTCACCGTGAGAAAAGAGTGGCCAACGAATGAAA
GAGTCTGAGAAAGAGAAATAGAAGTAAGGTGTTGAACAAG