Detailed information on CNT3084672


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3080286Vigna radiataBrassica juncea23.8229.2784.3896forward
CNT30645117Vigna radiataCannabis sativa62.2859.0682.87251reverse complement

Expression of CNT3084672

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MIDSSMCPFHSKPARSRSLSVPPAPCLLHRRSL

>peptide 2 (49 aa)
VPGVTPRQLTGIVDCPHKSPRDFPVCFVLTRTLSGKTSQKVTHPRITPG*

>peptide 3 (67 aa)
MHFGDIGSQINSFKLSFNCIVPYLYSLQIPLILVYDRFIHVPLPLEACQEPLLVCAPCTMPLAPAITP

Sequence

>CNT3084672
AAGTACCAGGTGTAACACCCCGACAACTTACAGGGATTGTTGACTGCCCCCACAAATCACCACGAGACTTTCCAGTGTGTTTTGTCCTCACTCGCACACT
TTCCGGGAAAACTTCCCAGAAGGTCACCCATCCCAGAATTACTCCAGGTTAAGCACGCTTAACCATGGAGTTCTTAAGGGTTAGGCTACCGAAAAGTAAA
TGCATTTTGGTGATATAGGTAGCCAAATCAATTCCTTTAAGCTATCTTTCAACTGTATAGTCCCATACCTATACAGTCTCCAGATCCCTCTCATTCTGGT
GTATGATCGATTCATCCATGTGCCCCTTCCACTCGAAGCCTGCCAGGAGCCGCTCCTTGTCTGTGCCCCCTGCACCATGCCTCTTGCACCGGCGATCACT
CCC