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Detailed information on CNT3084635


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727221Vigna radiataCorchorus capsularis14.5925.5683.48115forward
CNT30712577Vigna radiataGlycine max36.9360.8889.35291forward
CNT30393023Vigna radiataTriticum turgidum14.0925.486.49111forward

Expression of CNT3084635

Peptides detected in this lncRNA

>peptide 1 (46 aa)
RKKRKAFQFDRSSSEMVHSANNDTSMVDQVRKRETERGCTNDDNLT*

>peptide 2 (30 aa)
LEKRGKHFNSTEAAVKWYIQPIMIHPWWTR*

Sequence

>CNT3084635
TTAGAAAAAAGAGGAAAGCATTTCAATTCGACAGAAGCAGCAGTGAAATGGTACATTCAGCCAATAATGATACATCCATGGTGGACCAGGTGAGAAAGAG
AGAGACAGAGAGAGGATGCACAAATGATGATAATTTAACTTAAAAGAGAACATGATCATCAACCATCCAACCAAAGATCAACGTCCACCGATTCAACACG
AAAGGAACAACCCGCGAAAGTAGAATGAAGAGAAACACAAGGAAAAAAAAACATACACAGAAGAAAATCGAAGGTGAAATTCAATAATAGACAATTTTTT
TTTTTTGTTTATTTTTCTGATTTCGGGTCTAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGATGACTCCGGCGAT
GCCACCACGGAACCCAGGAGCTGGGCGATGATGTAGACAATACCGCGGAGGAAGGTGATGTTGCCTCCGACGAAGGCGCCGAAGGTGACGGCGGGGTTCA
CGTGACCTCCGGAGATGTTGGCGGAGAGGAGTCCGGCAGGTGAGGTGGCGGCGTTGTCAGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGAGCCGGCGAA
CACGAAGATGAAGGTGGAGATGAACTCGGCCAAAGCCGCCTTCAACGTGTCGGGGTGAGTGGCCTCCTCGGGCCTTCCGATGGCGATGTTTCTGATCGGC
ATCTTCAATCGACGGTGGTGATGATTACGACTGGTGAAAGATGAAGTGAACACCGAGATCACTCACTCAAATCACTCTCTGTTTCGCT