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Detailed information on CNT3084606


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30319789Vigna radiataAsparagus officinalis9.9251.9285.19108reverse complement

Expression of CNT3084606

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MVQGARTRSGSWQASSGRGTWTNRTYTGMRGIWRLYRYGTIQLKDSLKELIWLPISPKCIYFSVA*

>peptide 2 (65 aa)
MVQGARTRSGSWQASSGRGTWTNRTYTGMRGIWRLYRYGTIQLKDSLKELIWLPISPKCIYFSVA*

Sequence

>CNT3084606
TTATGACTTTTTTAGACTCTTAGTTTGTTAATTTTTGAGCTATAAAGTGTAGAATTTGTTATGGTGATTTTTGAGTGCTTGAGTTGGTTTAGTGCATCGT
GTTTCTAACCAAATGATATGATACTACATTTTCATCTATAAACATGTTTTTGTATCAATCTTGATGTTAAATGTGACACCCGGGCACTGACGAGGGCGGG
GAGTGATCGCCGGTGCAAGAGGCATGGTGCAGGGGGCACGGACAAGGAGCGGCTCCTGGCAGGCTTCGAGTGGAAGGGGCACATGGACGAATCGAACATA
CACCGGAATGAGAGGGATCTGGAGACTGTATAGGTATGGGACTATACAGTTGAAAGATAGCTTAAAGGAATTGATTTGGCTACCCATATCACCAAAATGC
ATTTACTTTTCGGTAGCCTAACCCTTAAGAACTCCATGGTTAAGCGTGCTTAGCCTGGAGAAATTCTGGGATGGGTGACCTTCCGGGAAGTTTTCCGGGA
AAGTGTGCGAGTGAGGACAAAGCACACTGGAAAGTCTCGTGGTGATTTGTGGGGGCAGTNAACAGTCCCTGTAAGTTGCCAGGGCGTTACAAATGGTATC
AGAGCCTAGCCTCTCCCAGTACGGTGTGGTTCGAGGACGAACCAGACGGAAGCTGGTGGGCATGTGACACCCGGGCACTGACGAGGGCGGGGAGTGATCG
CCGGTGCAAGAGGCATGGTGCAGGGGGCACGGACAAGGAGCGGCTCCTGGCAGGCTTCGAGTGGAAGGGGCACATGGACGAATCGAACATACACCGGAAT
GAGAGGGATCTGGAGACTGTATAGGTATGGGACTATACAGTTGAAAGATAGCTTAAAGGAATTGATTTGGCTACCCATATCACCAAAATGCATTTACTTT
TCGGTAGCCTAACCCTTAAGAACTCCATGGTTAAGCGTGCTTAGCCTGGAGAAATTCTGGGATGGGTGACCTTCCGGGAAGTTTTTCGGGAAAGTGTGCG
AGTGAGGACAAAGCACACTGGAAAGTCTCGTGGTGATTTGTGGGGGCAGTCAACAGTCCCTGTAAGTTGCCAGGGCGTTACATTAAAGA