Detailed information on CNT3084543


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641419Vigna radiataNymphaea colorata22.6914.683.7286forward
CNT30296934Vigna radiataTriticum aestivum26.3918.5987100forward
CNT30586176Vigna radiataMusa acuminata27.9717.3886.79106forward
CNT30136463Vigna radiataLolium perenne26.3913.6488100forward
CNT30579352Vigna radiataEchinochloa crusgalli26.9114.6687.25102forward

Expression of CNT3084543

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MKRNTRKKKHTQKKIEVVSGWELLVGVADEDDLVDDSGDATTDERADPVDPVVFPGPANNGRSECDG

>peptide 2 (31 aa)
MVHSANNDTSMVDQVRKRETERGCTNDDNLT*

Sequence

>CNT3084543
ATGGTACATTCAGCCAATAATGATACATCCATGGTGGACCAGGTGAGAAAGAGAGAGACAGAGAGAGGATGCACAAATGATGATAATTTAACTTAAAAGA
GAACATGATCATCAACCATCCAACCAAAGATCAACGTCCACCGATTCAACACGAAAGGAACAACCCGCGAAAGTAGAATGAAGAGAAACACAAGGAAAAA
AAAACATACACAGAAGAAAATCGAAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGATGACTCCGGCGATGCCACC
ACCGATGAGAGGGCCGACCCAGTAGATCCAGTTGTTTTCCCAGGTCCAGCTAACAACGGCAGGTCCGAATGTGACGGCA