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Detailed information on CNT3084441


BLAST search results

BLAST vs Swiss-Prot:
sp|P33083|AX6B_SOYBN, E-value = 5e-44

BLAST vs NONCODE:
NONTPRT003246, E-value = 2e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043292Vigna radiataPrunus dulcis10.9124.285.12121forward
CNT30560986Vigna radiataActinidia chinensis15.1529.5382.74168forward
CNT30171655Vigna radiataTrifolium pratense17.425.290.16193forward
CNT30648720Vigna radiataRosa chinensis15.5123.8684.88172forward
CNT30620093Vigna radiataCajanus cajan31.5636.3888.57350forward
CNT3051199Vigna radiataCucumis sativus8.8424.8186.7398forward

Expression of CNT3084441

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKPNVNTRGCEWLVFFVKGNDAVYIVLKIP*

>peptide 2 (37 aa)
MKVGSNMIRESQIVSVSLQHTLQDSPLGLLQILKLLA*

Sequence

>CNT3084441
TGCTGCACTGATTAAATTTTGGTAATTATAGTGCATGGTTTATGGCTGAATTATTCAGTGAAGAAATAAGGGCAGCACAGGTGCATATAAACTAAACCCC
AATTCTTAGAATATGAAATTTTGTTAGCTACAAGTTACCCATAGAAGTAGATGAGAGCAATCGAAAAAACCTATATACTAGGTCCACTACTATATACCTT
GGCTGGCAGTTAGGTAGTGGTGAAATCTTGTGTTTGATCGGGGGCATTAATTTTAACTTCACATGTGTGTATTAAACTTGAAAATCTTTATATCCAGTCC
ATTATAAACTGATGCTTCTCTGTGGCTGAAGAAACATACTATTAGCTCTGTTCAGACTGCGAAGCATATGGACAGTTATGCAGTGGAATTCATGATAAAA
ATCAAATTCTAATTGAATTGCAGAGAGAACTGGACATTTTAATTGATAAACAACAATACTTAGCAATTGAATTCGTTGTCACTACAAAAAATGGGGGAAT
CTTTACAAGTTGAGAAGATCCCTCCTCTACAAAATTTCTCTACTAATCTATGTCAGTGTCCTACTGTGTGAGCTTTATTTTCTATTCAAGCGAGAAGCTA
TATGTTGGAAGACATCTTCACTGCAAGGAATTGTGAGGCCTCCCATGGGATGATCATATCCAAACTCTTCCTCAGCTTGACTCAATAAGTCTTGAAATGA
AGGTTGGTTCAAATATGATACGGGAATCACAAATCGTGTCTGTTTCTCTCCAACATACACTGCAAGATAGCCCTTTGGGACTTCTACAGATTTTGAAGCT
GCTTGCCTAGCTGTGACTGATGGCCGTTGAATAGCTGGTATACGGAAGCCCATTTTTTGTTCCTGTTTAAAGGAAGAAGATCAATATCAAATTTAGGTGA
ATGAAACCAAATGTCAACACTCGAGGATGCGAATGGCTTGTGTTCTTTGTGAAGGGAAATGATGCTGTATATATAGTTCTAAAGATTCCCTAGAAACTAA
ATTCACAGAAAAGTAGCGTTAAAGGATGGAGGACATGCACATGAGATATCATGTGGTGCTGTCTTCAATGTCTCTGTCAAGGATAAAGTTGTGTAGAGTG
TGTTACCCC