Detailed information on CNT3084405


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372997Vigna radiataArabidopsis thaliana24.2510.0787.6773forward
CNT30563209Vigna radiataActinidia chinensis23.5921.1394.3771reverse complement
CNT3059454Vigna radiataArabidopsis lyrata27.9127.7286.984forward
CNT30714946Vigna radiataMalus domestica golden22.2611.5389.5567reverse complement
CNT30477933Vigna radiataArabidopsis halleri27.9127.7286.984forward
CNT30176611Vigna radiataVigna angularis100.3310090.07302forward

Expression of CNT3084405

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSWVTSACDPSGGIMVMEQGLGFTKLVWKLHDAACPLQVRS*

>peptide 2 (48 aa)
MESLRRLGFLGSWTGGHSVRLVSQSSDNLRLLTVEGSQAAAPPHHIAW*

Sequence

>CNT3084405
GCCGAGCTGGGTAACGTCAGCTTGTGACCCGAGTGGGGGTATCATGGTGATGGAACAAGGTTTAGGCTTCACCAAGTTGGTATGGAAGCTGCATGATGCT
GCTTGCCCACTCCAAGTTAGGAGTTGAGCTATGGAATCCTTGCGAAGGCTAGGGTTTCTTGGTTCCTGGACTGGAGGGCACAGCGTGAGGCTGGTTTCAC
AGAGCAGCGACAACCTCCGGCTCTTGACAGTGGAGGGATCACAGGCAGCTGCACCTCCACACCACATAGCTTGGTGAGCCATCTCTTGAACCATCACTTT
T