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Detailed information on CNT3084386


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 1e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171647Vigna radiataTrifolium pratense21.2611.4382.84169forward
CNT30410040Vigna radiataPapaver somniferum12.4523.6382.8399forward

Expression of CNT3084386

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MEYTFSFTLTARVEGNFGLMNYKAKDCKRS*

>peptide 2 (57 aa)
PRKCKCVVVTEYSTTSKCLNTASVRMFQFINIINGTNDFVPKHIFHFCMKAKGERKI*

>peptide 3 (37 aa)
MTSPRQQHGRYLRLNSPSAPQSLLRNKYKATYNLIAD*

Sequence

>CNT3084386
AACCCAGAAAGTGCAAGTGTGTGGTAGTAACAGAGTATTCAACGACAAGTAAATGCTTGAACACAGCGAGTGTGCGTATGTTTCAATTTATCAACATAAT
CAATGGAACCAATGATTTTGTTCCTAAACACATCTTCCACTTTTGCATGAAAGCAAAGGGAGAAAGAAAAATATAATCTCTACAAAATTGTTTGTTTGAA
TTAGATACTATCATGTGTGTCGGTGTCTGAGAAGTATTCAAGTGAGAACCGACATGATATTTAAGAAGACATCTTCTTTGCAAGGAATTGTAAGACCACC
CATTGGATGATGGTATCCATATTCTTCCTCTGCTTTGCTTAGCAAGTCCTGGAACGAGGGTTGATTCAAGCATCCAATCGGAATCACGAACCTCTTCTTT
TTCTCTCCGACATACACTGCAAGGGTACTCAAAACTTATATTCAGTGGTTGCATTTGTACAATGCCATTCATTGTGATAACAGCTTGAATGACAAGTCCT
CGCCAACAGCACGGAAGGTACTTGAGATTGAACTCTCCATCAGCACCTCAGAGTTTACTACGGAACAAGTACAAAGCAACATACAATTTAATTGCAGACT
GAGACATTGTTTGTTGCATTGGTATATTCCTCTATTGTCATCGTTGTGTATTTGGATGAAGTATTGGAATAATGGAATATACCTTCAGTTTCACTCTAAC
TGCCAGGGTGGAAGGTAATTTCGGGCTGATGAATTATAAGGCTAAGGATTGCAAGAGATCATAGACAGGTTTGATATCACAAGTCTGTTTTTTAC