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Detailed information on CNT3084365


BLAST search results

BLAST vs Swiss-Prot:
sp|P33083|AX6B_SOYBN, E-value = 1e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526763Vigna radiataPhaseolus vulgaris38.7173.1289.72389forward

Expression of CNT3084365

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MIQNMSSICLHLSQFHLHAVSSYRSEKLYLRTHLLHKEL*

>peptide 2 (34 aa)
MPKDVNDFGCPNCLQTMNIYIAIQNFAGYHLVLE*

Sequence

>CNT3084365
GGCCATGTGAAGAAGGGGCTACTGCTTGACACAGGTGATAAAAATTCGTTTATCATAACTTAGTTGGGCATCATCATATGATTGAATACTTGTCATGTAC
GGTGCTGCTACACGATGATAAGTGCAACTGGCTGTAGCAAAATATGAAGATAAAAAATTGCAGTCCCATTCTCAGCCTCGTGTTTTGATAAAATCATTTT
TCTAGTTCAACTGTATTGATGAAACCTTGCTCAGGTCGTTTGATTTAAATAAACATATGCTTAGCCAATTTCCTATTCAATAAAGTTCTTTTCTTTAAGA
TATATACATACATACACAAATATATATTATGAGAGAATAAAACGTTAAAAGGGTTAGTGTTCCCAAACTTTCTCATTTACATTAAATTTCATTTACAAAT
TCAGACATCAAACATGGAGAGGGAAATATTCTCAAGGTAAGAAACTATGATACAAAATATGTCAAGTATATGTCTACATCTAAGTCAGTTCCATCTTCAT
GCAGTTAGCAGCTATCGAAGCGAGAAGTTATATCTGAGAACACATCTTCTCCACAAGGAATTGTGAGACCACCAGTTGGATGGTCATAGCCAAATTCTTC
CTCGGCTTGACTCAATAGATCTTGAAATGAAGGTTGGTTCAAGTATGACACAGGGATCATAAACCGCTTCCTTTGGTCTCCAACATAGACTGCAATGTAA
CCCTTTGGCACATCCANAGCTTTTGAAGATGCTTGGATTACTGGAAGGGATGCCTTTCTGATACCGGGTAAACGAAAACCCATGTTTTATATATTGATAC
TTGGGAAGAGAAAGTTGGGAATAGAGAGTTGTAGATAGGATGCTAGTTTTTTAACTTCAAATGCCTAAGGATGTGAATGACTTTGGTTGTCCTAATTGCT
TGCAAACCATGAATATATATATAGCGATACAAAATTTTGCAGGATATCATCTGGTACTTGAATGATTGAGGGTGGAGGGCTGAGATAAGAGTCACGAGAA
TGATA