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Detailed information on CNT3084079


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94C25|Y5005_ARATH, E-value = 4e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525508Vigna radiataPhaseolus vulgaris26.0398.6291.59214forward
CNT30629487Vigna radiataVigna unguiculata55.2382.779.96454forward
CNT30146054Vigna radiataMedicago truncatula56.5734.3481.08465forward
CNT30149097Vigna radiataBrachypodium distachyon6.8120.991.0756forward
CNT30176115Vigna radiataVigna angularis35.476.5882.82291forward

Expression of CNT3084079

Peptides detected in this lncRNA

>peptide 1 (39 aa)
EKKAKVWVGFVRNPCYATFQHINHSAHCRSIIRKRLSTP*

>peptide 2 (32 aa)
MRSSTDASNLIHKFFTILFGCTQHLYXHNTTIG

Sequence

>CNT3084079
GGGAGAAGAAAGCAAAGGTTTGGGTGGGATTTGTAAGGAATCCATGCTATGCTACCTTCCAACATATCAATCACTCTGCTCATTGTAGGTCTATCATTAG
GAAACGTTTGAGTACACCATAAACCCACCATCGCCAACCTCTTTACAATCTCATTTTCTTCTGCTGTCATCTCCATATCTGGTCTCAAATCATTCTCCAA
CTCAAGCTTATTGTATGCCCAGTGTGGGAAGTATATCTCACTTGTATGACTTGCTTCGGCATTAATGTTCTTCCTTCCTCCAACCATCTCTAGCAGCATC
ATTCCATAACTATAAACATCAGACTTATGCGAAACTCTTCCAAGATTTCTGCTCCACATCTCTGGAGCTACATACCCCATTGTTCCTCTAGCATCTGACA
AGGAAACGATACTTTCATTCCTAGGACACAGTTTTGCCAACCCAAAATCAGATATCTTTGCACAGAAGTTGTCATCCAGAAGAATGTTATGTGGTTTTAT
GTCAAAGTGAAAAATTCGAGTGTTGCATCCCTTATGCAAGTATTCTAAGCCTCGAGCTATGTCCCTTGCAATTTGATACATAATATCCCAACTCAAGGCA
GAAAGGGTTTCATCTCTTGTTCTGTAAATGAATTTGTCAAGGGAACCATTGGACATGAATTCATAGATGAGAGCTCTCTTGTGACCTTTCAAACAAAATC
CAAGAAGAGAGACAACGTTAACATGAGAAGTTCGACTGATGCTAGCAACCTCATTCACAAATTCTTCACCATTCTTTTTGGATGTACTCAACATCTTTAC
NGCCACAACACTACCATTGGAT