Detailed information on CNT3084074


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535090Vigna radiataEucalyptus grandis50.5514.2983.94137forward
CNT30550041Vigna radiataIpomoea triloba31.376.3584.7185forward
CNT30403246Vigna radiataBeta vulgaris22.1414.3988.3360reverse complement

Expression of CNT3084074

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MIFSGITFSFFSYSFYLPSLLITKMDSSXV*

>peptide 2 (29 aa)
MYKKKIPTALATLTAPTTKSEIVLILDIK*

Sequence

>CNT3084074
CGAAAACTTGATACGAAGAAACGAATTTTTGTCCTCCGTTTGTGAGCTATATATCCTCGTTTAATTCTGGTNATTGAATAAATGATATTTTCAGGAATAA
CTTTTTCATTTTTCAGTTATTCTTTTTATCTTCCTAGTCTATTAATAACAAAAATGGATTCTTCCNATGTATAAAAAAAAAATTCCAACGGCTCTTGCTA
CTCTAACCGCCCCAACCACAAAATCAGAAATTGTATTGATACTAGATATCAAATAAAATAAAAATAGTAAA