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Detailed information on CNT3083861


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30174921Vigna radiataVigna angularis14.9121.7287.74106forward

Expression of CNT3083861

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MFMFMFFLSLSLSFSLSIFSFYQWWEEHV*

>peptide 2 (31 aa)
MLLLFIDFHSQKIYIKRKGERKRVFCAVYIT*

>peptide 3 (33 aa)
LLFTDVNFQTTTNKNSEMDTEYTQNSLNALVIH*

>peptide 4 (64 aa)
MGLGRLMVTLKSKMRSLKIVKKSEYDKVEKSESMRMEIRSRKARKLIEQTLKVADSPKSKTFAF*

Sequence

>CNT3083861
CTTTGTTATTTACAGATGTAAATTTTCAAACAACTACGAATAAGAATTCTGAAATGGACACAGAATATACACAGAATTCATTGAATGCTCTTGTTATTCA
TTGATTTCCATTCACAAAAAATATATATAAAAAGAAAAGGAGAGAGAAAGAGGGTTTTTTGTGCAGTGTATATAACATAAGAAAGGTCAAAAGTTTTCAC
AATGAGTTCTTGAAAAGAGTGTGAAGAAAGTTGAAGGAAAGAAGAAAGAAAACAATGGGATTGGGAAGGTTGATGGTGACATTGAAATCAAAGATGAGGA
GTTTGAAGATTGTGAAGAAGAGTGAGTATGATAAAGTGGAGAAGAGTGAAAGCATGAGAATGGAGATTAGAAGCAGAAAAGCCAGAAAACTTATTGAACA
AACTCTCAAAGTTGCTGATTCTCCAAAGTCCAAAACTTTTGCTTTCTGATTATCTTCTTCTTTTCTGCTCAAACATTTCTTAGTTCTTCTTTAATGTTCT
TTTCCTTTCAATTTTGTTTCATGCATCATATCTAGTTTTTTCAATTAGATCTTTGTTTTTTCTTTATGTTTATGTTTATGTTCTTTCTCTCTCTCTCTCT
CTCTTTTTCTCTCTCAATCTTTTCTTTTTATCAATGGTGGGAAGAACATGTGTGAGCTTTGCTCATGCCATTTTCTCAGATAGGAATGGAAAACTATGCA
AGAAAAGGGGA