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Detailed information on CNT3083729


BLAST search results

BLAST vs Swiss-Prot:
sp|P46293|RS16_GOSHI, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176592Vigna radiataVigna angularis69.1978.5395.47640forward

Expression of CNT3083729

Peptides detected in this lncRNA

>peptide 1 (34 aa)
HDTRTKCTQIDQNPKQFKHKSYKTRENVNTSPNS*

>peptide 2 (42 aa)
MLVVSAAPSSQLGFGFLSQRLTQVTYLQFSNVYGFIYSSKVF*

>peptide 3 (46 aa)
MRMSTPAKRWRPRRRMGSKALKRRISGSTSSIGHPLILIRPRPRLQ*

>peptide 4 (46 aa)
MSTALDTDAHVNSGKTVAAEEEDGLESLEAEDLRLDELNRTSVDLD*

Sequence

>CNT3083729
CATGACACAAGAACCAAATGTACGCAAATCGATCAAAATCCAAAACAATTTAAACATAAGTCATACAAAACTAGAGAAAACGTAAACACTAGCCCAAACT
CGTAATCCCTGGGAACCGGTAGAGCGGAGGCATCCAAATAGAAGCAGAAACGCAAACAAACAAAGCTATTTCCAATCAAAAATAAACAATATAAAATAGA
GCATCCAAACAATTGTATTTAAATTAACGACAGAACTAAAACTTAACTAAAACATTATAAGAGTTTCCAAAATCCGATTAAAAACTCAGCGAAACAGAAA
AGGCAGAGAGTACTATCAAGACATCTCGATAAAATATAAAGAAAAGGGAAAATGGACTGAAATCAACGGTAGGATTTCTGGAACCTGGCGCGAGCACCGC
GACCACCGAACTTCTTGGGCTCGCAGCGGCGAGGATCAGCAACGAGGAGTGTGCGGTCGTACCTGACGAGGATGTCTTTGATCTCCTTCTTCGACTGCTC
ATCCACGTACTTCTGGTAATAGGCGACGAGAGCCTTGGCGATGCTTTGACGGATGGCATAGATCTGGGAGGTATGTCCACCGCCCTTGACACGGATGCGC
ATGTCAACTCCGGCAAAACGGTGGCGGCCGAGGAGGAGGATGGGCTCGAAAGCCTTGAAGCGGAGGATCTCCGGCTCGACGAGCTCAATAGGACATCCGT
TGATCTTGATTAGGCCGCGGCCGCGTTTGCAGTAAGTAACTGCCACCGCCGTCTTCTTGCGGCCGAAACACTGGACCTGCTCTAATGCTGGTGGTGTCTG
CTGCGCCATCTTCGCAATTAGGGTTTGGGTTTCTCTCACAGCGCCTCACTCAGGTAACCTATCTGCAATTTTCTAATGTTTATGGCTTTATATATTCATC
GAAGGTTTTTTAGGCTGCGGAAATA