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Detailed information on CNT3083498


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690834Vigna radiataOryza sativa25.436.5891.5359forward
CNT30677945Vigna radiataSetaria viridis78.8812.0884.15183reverse complement
CNT3021516Vigna radiataCitrullus lanatus73.289.2487.65170reverse complement
CNT30730496Vigna radiataCorchorus capsularis71.5515.2787.95166forward
CNT30524944Vigna radiataPhaseolus vulgaris79.7418.5799.46185reverse complement
CNT30201813Vigna radiataPisum sativum26.293.7295.0861reverse complement
CNT30492881Vigna radiataOlea europaea37.0713.3389.5386reverse complement
CNT30710142Vigna radiataGlycine max79.7441.4895.68185reverse complement
CNT30284960Vigna radiataTriticum aestivum37.079.6888.3786reverse complement
CNT30384007Vigna radiataTriticum turgidum26.727.190.3262reverse complement
CNT30569656Vigna radiataActinidia chinensis27.167.4896.8363reverse complement
CNT30543269Vigna radiataBrassica napus27.162.1395.2463reverse complement
CNT30237740Vigna radiataBrassica oleracea25.434.9291.5359forward
CNT3077654Vigna radiataBrassica juncea25.4313.1191.5359reverse complement
CNT3018194Vigna radiataZea mays78.8831.2384.15183reverse complement
CNT30610163Vigna radiataGossypium raimondii27.1611.8493.6563reverse complement
CNT30228329Vigna radiataAnanas comosus27.5930.9293.7564reverse complement
CNT30684722Vigna radiataTriticum urartu37.078.0688.3786reverse complement
CNT30364733Vigna radiataSorghum bicolor25.8624.5986.6760reverse complement
CNT30355468Vigna radiataLactuca sativa79.7415.1388.65185reverse complement
CNT30416238Vigna radiataPapaver somniferum79.7424.1587.03185reverse complement
CNT30324879Vigna radiataAsparagus officinalis79.7452.7186.49185forward
CNT30604848Vigna radiataOryza punctata21.5515.299250forward

Expression of CNT3083498

Peptides detected in this lncRNA

>peptide 1 (49 aa)
KKKKKKKKKKKKKCVQLEHENVTELVLVTLRNGIEEGERFSNRTRKRIQ*

Sequence

>CNT3083498
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGTGTGTTCAATTGGAACATGAAAACGTGACTGAATTGGTCCTAGTTACTCTTCGGAACGG
AATAGAAGAAGGGGAGAGATTCTCGAACCGAACTAGGAAACGGATCCAATGACTTCAAAAAAAATTGAACGAGGAGCCATATGAAGTGAAAATCTCATGT
ACGGTTCTGTAGAGTGGCAGTAAGGGTAAGAG