Detailed information on CNT3083483


BLAST search results

BLAST vs Swiss-Prot:
sp|A4QLL9|CLPP_LOBMA, E-value = 7e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30268958Brassica junceaChenopodium quinoa78.6445.2186.57335forward
CNT30200024Brassica junceaPisum sativum20.6612.7282.9588forward
CNT30504293Brassica junceaNicotiana attenuata52.828.9188225forward
CNT3045660Brassica junceaPrunus dulcis54.4655.3787.5232forward
CNT3060029Brassica junceaArabidopsis lyrata93.1929.7497.23397forward
CNT30598582Brassica junceaFraxinus excelsior61.9780.4989.39264forward
CNT30607170Brassica junceaGossypium raimondii47.8928.2287.25204forward
CNT30218200Brassica junceaKalanchoe fedtschenkoi90.1434.1385.68384forward
CNT30655370Brassica junceaRosa chinensis72.5426.4188.35309forward
CNT30154187Brassica junceaPrunus persica78.440.6387.43334forward

Expression of CNT3083483

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKKKENEVLYFTLMWKRKTGVSFFFIILSFFP

Sequence

>CNT3083483
TCCGACTAGGATAAAGGATGCTATTGAAGCGGCCAATCCCATGCATATTGTCTGTACATCGGGTCGCACAAATTGCATAGTATCATAAATAGCCATTCCA
GATATTACCCATCCACCAGGAAGAGTTTATAACAAATAAAGATCTTTGGTATCCTTTTCTATACGAGAATATATCATAAGACTAATAAGTTGATTCGAAA
TTTCGGTATCAACCTCTTGGCCTAAAAAAACAATCTTTCTCGATAAAGTCGGTTGTATATGTCAACCCAAGATGTATCTCCTTCTCCAGGACTTCGAAAA
GGTACTTTTGGAACGCCAATAGGCATGAAATGAAAAAAAAAGAGAATGAAGTTCTCTATTTCACTTTGATGTGGAAACGTAAGACTGGGGTTTCATTTTT
TTTTATCATATTATCCTTTTTTCCTA