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Detailed information on CNT3082978


BLAST search results

BLAST vs Swiss-Prot:
sp|A4QL96|RPOC2_LEPVR, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530066Brassica junceaEucalyptus grandis2.6534.6293.02215reverse complement
CNT30699079Brassica junceaQuercus lobata2.2853.6292.43185forward
CNT30617716Brassica junceaSesamum indicum4.6890.0584.21380forward
CNT3019361Brassica junceaCitrullus lanatus3.7610092.79305forward
CNT30632296Brassica junceaVigna unguiculata4.846.5988.21390forward
CNT30199661Brassica junceaPisum sativum8.3499.5688.18677forward
CNT30711743Brassica junceaGlycine max0.822.8995.3865reverse complement
CNT3045209Brassica junceaPrunus dulcis2.1158.9792.4171reverse complement
CNT3085220Brassica junceaVigna radiata3.7925.992.21308forward
CNT30541456Brassica junceaBrassica napus10.9510099.66889forward
CNT30234601Brassica junceaBrassica oleracea1.8431.6399.33149forward
CNT30129950Brassica junceaCorymbia citriodora2.9748.5992.12241forward
CNT30716479Brassica junceaMalus domestica golden3.3990.4687.64275forward
CNT30596895Brassica junceaOryza meridionalis2.9120.8383.05236forward
CNT30155137Brassica junceaPrunus persica2.5730.3391.39209forward
CNT3057109Brassica junceaAmborella trichopoda14.2551.5884.71157forward
CNT3039151Brassica junceaCucumis melo6.5562.2291.92532forward
CNT30150636Brassica junceaBrachypodium distachyon2.0974.5684.71170forward
CNT30101589Brassica junceaOryza rufipogon7.1687.7684.34581forward
CNT30116701Brassica junceaOryza nivara1.7764.8687.5144forward

Expression of CNT3082978

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MPLHNFLKDFPDNRLFFTNLTLSNSYVRSQMLSN*

>peptide 2 (34 aa)
MRYFLSDPFRTLGCHMRLNFIFPYVERSINITIY*

>peptide 3 (39 aa)
MLLFSRDMSDRGHPKLIEGDESLSFLKIKISIKSHIAVY*

>peptide 4 (35 aa)
MHFLRNEKKAIYFHFVFCLKFLDSSILNHILFLDD*

>peptide 5 (34 aa)
MDYICLHKYLDECRSLIHRVQSAYLESVQKWDLQ*

>peptide 6 (41 aa)
MPVTCTCRMNQILIKFDFSIIRGSYMFGSTSCKYSTGMKSS*

>peptide 7 (40 aa)
MVLFWLYIDFHKKIVQDLLLWTFPHNNNYYNFDEENTNSI*

>peptide 8 (37 aa)
MSELTRRGPNSHGCPIILFYEYHIIRYHMNKLEKNLV*

>peptide 9 (40 aa)
MSGYLICLVRKMDIPRKYFEFNPFFFSLHSDQPADLASYI*

>peptide 10 (39 aa)
MKSRIKPFVLTSTTKARTSSREEFLLSWSQFKTKQVRTN*

>peptide 11 (29 aa)
MTIPHGLSTDSIIKKCIHGFLYQFFLTHY*

>peptide 12 (29 aa)
MGFDNEFESMIAKLPFLDLDFLGQELCPS*

>peptide 13 (29 aa)
MYIPIMMVFFQNQTLLFSILDKPALRRYR*

>peptide 14 (43 aa)
MTNCGSNIYKKSLFFYTSYYQIVCINLMIVTKRFIVNFDRNFF*

>peptide 15 (45 aa)
MRLFPGYSGSNTHGLAVCLLASYNSENTSFLEASCSYLSSKGAIR*

>peptide 16 (45 aa)
MFEARCCLIRPRITNVWKSSIAISRGNPQRCNESEGPTTITERPE*

>peptide 17 (47 aa)
MSVLCIPFDIFVSENQQIQLHIVHKIASLLFHLRSLDNFHKRKFHSL*

>peptide 18 (47 aa)
MYLRCISSSSRKRHHMDWIERVRHPKIRIHFLSQIFTCSIPYLNRLA*

>peptide 19 (54 aa)
MPLCRDILSVLSGKWISPENILSSILFFFLSTRINPPTWLLIFKVIRVSTPMIL*

>peptide 20 (60 aa)
MSYRTCQFYVSHLISSYPRINKFNSTLFTKLRVFFFISDHSIISTSANSTLYRPKNPFTK*

>peptide 21 (62 aa)
MKVSSHPAQVVISNKDKERGRTFQLYFIKSSENPKRIYALLKFSVQTNHHFIDSINSSLISI*

>peptide 22 (93 aa)
MSGRALLLFREAIHSDVMKVRVQRQSPNAPNNRPVCQAESREIFPLFLQLHLKMTCKPYYDHPSWVVHGFHYQEVYPRLLVPIFPDTLLIPLV*

>peptide 23 (96 aa)
MAEDSGKICTSSGMKKKRSTFISYFVLNFWTPRYSIISSFWTIESAFRVPYLRIPELFLLYLGSSKKAKILFLRKIPFMGISIEIPECGMNSFACS*

>peptide 24 (98 aa)
MMGLNSGGRTGKRHKTIHSGSIFVRIKCLANSIRLTKKSFLLTIFRSSHSFPVGPSSPNCFHSTNEFSIIIRKSKSANCSRIAPAPVEISRFLNISKP*

>peptide 25 (30 aa)
MKSIGFCHLSNYLSIRYFFSGPSTYLLRRN*

>peptide 26 (31 aa)
MIPLFPCLPATLSPTLISRFCEIYTRIISGL*

Sequence

>CNT3082978
CCCCCTGGGATCGATAAACCTTTTGAATCTTATTAACCAAAGAAATACGACTTTGCACTATAGTTAGCTCAGCACCAATCAAGAATCCCCAAGGAATTCC
AAGAATTCTTGTTATACACCTGTTCCAACCCTTAATCCGCTTTTCTAAGTTCAGTGATATTGAATCAATCGAGCGGACTTCTAACACCTGTTCTACTTTT
GGAAGACCTTGGGTTATATCACCGGATCTCGATTTTTCATATATAAATGTAACTAATGTATCCCCTTCGTAAAGAATTTCTCTATAATGCCCGTGAACTT
TTGCTCCCGGAGTAGCCAAATAGGGCTTAGCGGATCTTATTACTACAGAATCCCTTTGAACAATTAAAACTTGACCCGATTTTAGGTATGGTTCTTTTTT
GGCTATACATAGATTTTCACAAAAAAATTGTCCAAGACTTATTATTGTGGACGTTTCCTCACAATAATAATTATTATAATTTTGATGAAGAAAATACCAA
TTCAATTTGAATGGATTCAAAACAAGGTTACTGTATGGATCTAGATTAAAAATTCTTCCGTTTTCATCTATTAAATAAGAGTGAATTATTTGAAAAATAT
ATTTGAAGTTATCAAGTTGCAAATATTTAATTACAGAGATCTGATTATAAGTTAGTAAAGGCAAAAATGAATAAAAATTCGAAATTTGAATGGCTGTTCC
TAAGGGGCCCGACGAATTTTGAATTGTAATTAGAGGTTTTTTTTTTATTGATTGGTTTATAACATTGTGATATTTTACATGATTAAATGGACCGATTCTA
AAACAATTAGAGGATGATAAAATTAACAAAGATTGGGATTCCTTATTTCTGAACATACGAATAGTTCCGTGATTTTGTCTAAGCGATTGTTGAAGAATGC
CAGCCTTGGGAGAAAGCGAATAAAACGGATTCACGGAATCTGCAGAGATCAATCCCGAATCCGGCGGATTATTCCTTTTTCTTATATACGAAATATGGGA
TTTCACTAAGCCAATTCTTATGAAATCTCGAATCAAACCCTTTGTACTTACTTCAACAACGAAAGCGCGGACCTCCTCGAGGGAAGAATTTTTGTTGTCT
TGGTCCCAATTCAAGACTAAACAAGTGCGAACCAATTGAATACTTGTGTCAGAAATTCCTCGAGTTGGTTTACCATTTCCATAAAGGATATAGTTGAAAA
CTCGAAGTTGAATATTATCCTTTTCCCGAAAGAGATCTTGTGGGAAGAGTGTTGCTAAATTTATACTGTCCATTATCTCATAGGTGGCTACGGGCCGCAC
CAAAACAAAAAACTTTTTCTTGGTTGGTGTGATCCGTTGGGCATAAATCCAATTTTTTAAATTTTTTGATTCTTTAGAGTTTGTTTTTCCCCTTCCTGGC
GGTATCAAGATGCCACTATGTCGGGATATCTTATCTGTCTTGTCCGGAAAATGGATATCCCCCGAAAATATTTTGAGTTCAATCCTTTTTTTTTTTCTCT
CCACTCGGATCAACCCGCCGACTTGGCTTCTTATATTTAAAGTGATTCGTGTATCGACTCCAATGATACTATAGTTCTGTACCATTATGGCGGAGGATTC
GGGTAAAATATGCACTTCCTCAGGAATGAAAAAAAAGCGATCTACTTTCATTTCGTATTTTGTCTTAAATTTTTGGACTCCTCGATACTCAATCATATCC
TCTTTTTGGACGATTGAGTCCGCCTTTAGAGTTCCATATTTAAGAATTCCGGAACTCTTTCTTCTGTATCTAGGATCATCAAAAAAAGCAAAAATACTGT
TTCTACGGAAAATACCATTTATGGGTATTTCAATCGAGATACCTGAATGTGGTATGAACTCTTTCGCTTGCTCTTGAATCGATTGGAATGGAATGAGAAA
TCTATTTCTTCGCCTTTTTGCTAATAAATCCGAATTCTCATGAAAAATAGCAGAATATATGAAATTATAATGACTAGTACCTACGATTCCATTCAATTCT
GAATAATTGGGAATCCCAGATTTTTTTTTATCAGAAAAATCTGAACTGAAAAATTTTTTGCTCACTTGATCATTATTCACTGAGAGGCTAGAAATAGATT
TTCTTTCGACGGAAAGAAAGGTGGATGTTCCCTCGCGAATCTCAGCAATCACTTGTTCTGATTCCACATATTGATCATTTTGAACTAAAAGAAAACTTTT
TGGTGGAATAGTCACGCTATGTATAATATCTTCGCTCTCAATAATTACAGACAAGTCTATATAACATAGAAAGGCAGGATGCCCGTGACGTGTACGTGTA
GGATGAACCAAATCCTCATTAAATTTGATTTTTCCATTATAAGGGGCTCGTACATGTTCGGCAGTACCTCCTGTAAATACTCCACCGGTATGAAAAGTTC
TTAATGTTAGTTGAGTCCCCGGTTCGCCAATAGATTGACCCGCAATAATACCTACAGCTTCCCCCAATTCAACTAGGTCACCATGAGTGGGACTCCGGCC
ATAACATAATCGACAGATCCAAGATGTACTCCGACAAGTAAAGGGAGTTCGAATAGATATTGATTGTGTTCCAAAGGTTATGAATCGATTGACAAGTCCA
ATCCCAAGATCTTGATTTCGAAAGGCGACACATCGGGAACCTATATATATATCGTCTGCTAAGACACGACCAATTAATGTTTGGATAAAAATTCTTTCTG
ACATCATCCGACTTTTATTTCGAGGACTCACAGAAATCCCTCGGATAGTGCCACAATCCGTTCGACGTACAACAATATGTTGAACTACTTCAACAAGTCG
ACGCGTAAGATATCCAGCATCTGATGTGCGGACCGCAGTATCTACAACTCCTTTACGGGCTCCATAGCAAGAAATAATATATTCTGTTAAAGACAGTCCT
TCGCGTAAATTGCTTTGAATAGGTAAATCAATCATTTGTCCTTGGGGATCCGACATTAATCCTCTCATACCTACTAATTGATGTACTTGAGATGCATTTC
CTCTAGCTCCCGAAAAAGACATCATATGGACTGGATTGAAAGGGTCCGTCATCCTAAAATTAGGATTCATTTCCTGTCGCAAATATTCACTTGTAGCATA
CCATATCTCAATAGATTGGCGTAATTTTTCTACCGCATGTACATTCCCATAATGATGGTGTTTTTCCAAAATCAAACTTTGTTGTTCAGCATCTTGGACA
AGCCAGCCCTTAGAAGGTATCGTTAAAAGATCATCAATTCCTAATGAAATGGATGTAGCAGTTGCTTGCTGGAAACCCAGAGTCTTTACTTGATCTAGGA
TGTGTGATGTATATGCCATCCCGAAGTGATCTATTAATCGGCTAATAAGTCGTTTAATAGCAGTTCCATCTATCACTTTATTGTGAAATACCAGATTGGC
CCGTTCCGCCATAAGTACCTCCATATTCTGCTGAATGGGATTCGACAATGAGTTTGAGTCAATGATTGCAAAACTTCCTTTTCTCGATCTTGATTTTTTA
GGTCAGGAACTATGTCCGAGTTGACTCGGAGAGGTCCGAATTCACACGGGTGTCCTATAATTCTTTTTTATGAATACCATATTATTAGGTATCATATGAA
CAAGCTTGAGAAAAACCTTGTATAGCTTCCTCGATTTCTCGATAAAAAGAAATATGACCAACTGTGGTTCGAATATATATAAAAAAAGTTTGTTTTTTTA
CACTTCTTACTATCAGATAGTGTGCATAAATCTCATGATAGTTACCAAAAGATTCATAGTGAACTTCGATAGGAACTTCTTTTGAAGCAATAACGCGTTG
ATCTAATTGCCACCGAAGCCACAAAGGACTATCTAAATTGATTCTTTTCTGCCGATAAGCTCCAATTGCATCATAGGAATTGCAAAAAAAGGGTTCTTTC
ATATACTTATAGTTTGTTTCGTAAATTCTTTCATTTTGATAGTTTTTTCGATTACATGGATTATATCTGTTTGCACAAATACCTCGACGAGTGCCGCTCG
TTAATACATAGAGTCCAATCAGCATATCTTGAGTCGGTACAGAAATGGGATCTCCAATAGCTGGAGATAAGAGATTCATATGAGAAAACATAAGTAAACG
AGCCTCTGCTTGAGCTTCTAAAGATAAAGGCACATGAACAGCCATTTGATCCCCATCAAAGTCTGCATTGAACCCCTTACAAACTAATGGATGTAAACAA
ATAGTGCGTCCTTCCACTAAAATGGGTTGGAATGACTGTATGCCTAATCTATGTAGAGTAGGTGCTCTATTCAGTAATACGGGATGCCCCTGCATAACTT
CTTGAAGGATTTCCCAGACAATCGGCTTTTTTTCACGAATTTGACTCTTAGCAACTCCTATGTTCGAAGCCAGATGTTGTCTAATTAGACCACGAATTAC
AAATGTCTGGAAGAGCTCTATTGCTATTTCGCGAGGCAATCCACAGCGATGTAATGAAAGTGAGGGTCCAACGACAATCACCGAACGCCCCGAATAATCG
ACCCGTTTGCCAAGCAGAGTCTCGCGAAATCTTCCCTCTTTTCCTTCAATTACATCTGAAAATGACTTGTAAACCTTATTATGACCATCCCTCATGGGTT
GTCCACGGATTCCATTATCAAGAAGTGTATCCACGGCTTCTTGTACCAATTTTTCCTGACACATTACTAATTCCCCTGGTGTAGATCTACTTGTTGTTAA
TAGATCAGTAAGAGTATTGTTCCGATAGATAACTCTTCTATAGAGTTCATTAATATCTGAACTCATCAGTTTACCCCCTTCTATCTGAATGATGGGTCTC
AACTCGGGAGGCAGAACCGGTAAGAGACATAAAACCATCCATTCCGGTTCTATATTTGTTCGAATAAAATGCTTAGCTAATTCCATACGTCTAACTAAAA
AATCTTTTCTTCTTACAATTTTTCGATCTTCCCATTCATTCCCCGTGGGACCTTCTTCTCCTAATTGTTTCCATTCTACCAACGAATTTTCTATAATAAT
TCGCAAATCTAAATCGGCTAATTGTTCTCGGATAGCACCCGCCCCAGTAGAAATTTCTCGATTTCTAAATATATCGAAACCTTGAGTAGTAAAAAAAAGT
GGGATGCTGTATTTCCAGGATTGAATTTCATATTCAAATGAACCTCGTAATCGTAAGAAAGTAGGTTTTTTCGTTATGGGCCTAGCAAAAGAAAAATTGG
GATAGGGTCCACTATATGATCTCCCCCCCTCAAAACCGGACATGAAAGTTTCCTCTCATCCGGCTCAAGTAGTTATATCAAATAAAGATAAAGAAAGGGG
TCGCACTTTCCAATTGTATTTTATAAAATCAAGTGAAAACCCAAAAAGAATCTACGCCTTACTCAAGTTCTCAGTGCAAACCAACCACCATTTCATTGAT
TCAATTAATTCTTCTTTGATTTCTATTTAGATTCTTTAGTGAATTCAAAATTACGACAGAAAAAAGAAAAAAATGTCAAATTCTTGAGTAGTCTACTTCC
CTTCGAATGCCGGAATACTTTTTACCTTAAGTGAAAGGAATGCCTTAGAATTCATACGGGATTTATTTGTCTATGTATTGTTCCATTCGATCTTTTAGGT
CCTGCGTTACCTCGATGGTTATGCCACAATATTCTTAAAGCTTATATGCGATGTATAGACTTCTCCAACCATGACATATTTGTTTACTTCAATATAAAAA
ACCAAATTTCTTTTCGTTTAGAAAGATAAGGGAATGCTTAATTCGACAAAAAAAAGGTCTTCTTTTCACGAGGTACGACTATCAATTTGAAGTTACTTTT
TTTTTACTGAATCGACCATAGACCAATCGCCCTTGTTATTTGGGAGTATTGAATACACCCACAAGTCTGAGCTTCATGTTACTCTTTTCAAGAGACATGT
CAGATCGAGGGCATCCCAAATTGATTGAAGGGGATGAGAGTTTATCATTCTTAAAAATAAAAATTTCGATCAAATCACACATCGCAGTATACTAGACCTT
CTAATTCTTTAAGAGGTTTATCTAAAAGATTCGCAATATAACTAGGAAGACGTTTCAAATACCATACATGAGTTACAGGACATGTCAGTTTTATGTATCC
CATTTGATATCTTCGTATCCGAGAATCAACAAATTCAACTCCACATTGTTCACAAAATTGCGAGTCTTCTTTTTCATCTCCGATCACTCGATAATTTCCA
CAAGCGCAAATTCCACTCTTTATAGGCCCAAAAATCCTTTCACAAAATAATCCATCTTTTTCCGGTTTATTGGTTTTGTAATGAAAAGTATAGGGTTTTG
TCACCTCTCCAACTATCTCTCCATTAGGTATTTTTTTAGTGGCCCAAGCACTTATTTGCTGAGGAGAAACTAATCCAATTCGGAGTTGTTGATGTTTATA
CCGATCGATCATATAAGAAATTTTGTGATTCATTCCGATTAAACTTCCTTCCTATTAATCTGGAAATTCTTCTCAGATACAAGGAAATGATTCAGTTCCA
GAGCCAAAGATCGTAGTTCTCGAACAAGTAATCGAAAAGATTCTGGAGCATCTTCTGGTTTAGGTATTGCTCCTCCAATGATAGTGGTACCAAGTACTTC
TTGGCGAGCTCTAATATGATCAGATTTATAAGTAAGCATCTCTTGTAAAATATGAGCAACACCAAACCCCTCTAGAGCCCAAACCTCCATTTCGCCTACC
CGCTGCCCCCCCTGCTTAGAACGGCCTCTAAGGGGTTGTTGTGTAACAAGTGCATAATGTCCACTAGAACGTCCGTGTATTTTATCATCAACCTGATGAA
TTAATTTCAAGATATAGGGCTTTCCTATTATCACAGGCTGTTCAAAAGGATCTCCCGTTCTTCCATCAAAAATGCGGCTTTTTCCTGGATACTCGGGTTC
AAATACCCATGGATTGGCTGTTTGCTTACTAGCTTCATATAATTCAGAAAATACGAGTTTTCTCGAAGCCTCTTGTTCATATCTCTCATCAAAAGGGGCT
ATTCGATAATGTCTATCTAGCAAACTTCCCGCTAATCCAAGCGAGCATTCAAATATCTGTCCTACATTCATGCGTGAGGGTACTCCTAATGGGTTGAAGA
CCATATCCACGGGTCTCCCGTCTTGCAAATAAGGCATATCCTGTCTAGGCAAAATTTTGGAAATGATACCTTTATTTCCATGTCTTCCGGCTACTTTATC
ACCTACTTTGATTTCACGTTTCTGTGAAATATATACACGAATTATTTCGGGGTTATAACTTGAACCCCCCTTTTTCTGAACCCATCTCACATCAATAACT
CGACCTCTACCACCTATAGGCAATTTTAAACAAGTTTCTTTTGAAGTCGATACCTGAATGCCAAGTATGGCCCGTAATAATCTATCTTCCGGAGCATACG
AGGATTCTTTCGCCATCTGAGGCGTTAATTTACCTACTAAAATATCACCCGTTTCAACCCACGATCCTAGCATCACAATTCCATTTTTGTCTAAATTTCG
GAGTAAACGGCCCTCTAGATGCGGTATTTCCTTAGTGATCCTTTCAGGACCTTGGGTTGTCACATGCGTCTGAATTTCATATTTCCGTATGTGGAAAGAA
GTATAAATATCACCATATACTAGACACTCACTAATGAGTACCGCATCTTCAAAATTGTATCCTTCCCATGGCATATAAGCCACTAATATATTTTTCCCCA
AGGCGAGTTCCCCACCAACTGTAGCAGCACCATCCGCTAAAATCTGTCCCTTTTTAATACATTTACCCCGGCGAACCTGAGGTTTTTGATGCATACAAGT
ATTTTTGTTTGAGCGTTGATACATAATTAATGGAATACTTAAAGTATTCTCATTTCCCGATAAAATTATCTTCTCAGTGTCAGTATAAAGGATTTTTCCC
TCGTGTTCGGCTATAGCGGGAACCCCCGAATCTAAAGCCACTTGGCGTTCCAATCCAGTTCCAACAATGCACTTTTCGGACCGAGAAAGTGGAACTGCTT
GACGTTGCATATTAGAACTCATTAAAGCTCGATTCGCATCATTATGTTCGATAAAAGGAATTAGGGAAGCTCCAATGGAAAAATATTGGAAAGGAAAAAT
GCTTCGAAGATGAACCTCT